Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1159 ATGGGTTTATATGAGCATTCAGATGTTCTTCAGTGGGGTCTTAATATTCTTAATGGTGATCCTGGTTACAATACTGGATACTACAGCGATGTAATTCAAGATGATACTAGCGACATCTATAATGGACACTATTTCCAAAACAATTATGAAATTGATTGTAACCATGTAGAGAATGATGAGATTATTGCTCGTACTCTTCAAGAAGAGTTTTCGCAGCTAGAGATTGATGAATGTTCAAGGTATGTACAAGAAGGTGAAGGACAATCACAAGCTCCCGAGACTGAGACTGAGACCGAGCCTGCATATGATTGGCATAACTCCGCGATGGTGAACTATTGTCCAGGAGGTCATGATTATGAACAAGAAGGAATTGATGATGTAGAACCTTCTAGTTCATGTTCTAGTCCCTGTGAAACAGGGGAATCTTCATTGGAGCTAACTGACAATTATCCACTTGACGAAGTAGGGAGTAGATTGAGTGAGATGATACTAATCCCTCATGTTCCGAAAATCAATGGAGAAATTCCTTCAATTGATGAAGCAACATCAGATCATCAAAGACTTCTGGACAGATTGCAGGTATACGACTTTGTGGAGCACCGGGTACAAGGTGATGGTAATTGTCAGTTCCGTGCACTATCCGATCAATTGTATAACGCACCTGATCACCACAAATTTGTGAGACGACAAGTGGTGAATCAGCTCAAATCTAATCCTGAAATTTATGGTGGATATGTTCCTATGGAATATGATGATTACTTGGGGAATATGTCTAAGAGCGGAGAATGGGGTGATCATGTCACTCTACAAGCAGCTGCTGATAAGTATGGCGTGAGAATATTCGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATTCTTCCGAATTTTGAGAAGCCGAAAGGAGTGATTTTCCTCAGTTTTTGGGCAGAGGTACATTACAACTCTATCTACCCTCAAGGAGATGTAGCTTCAAGTGACTCAAGAAAGAAAAAAAGGTGGTGGAGGAGGAACTCTGGAAATAAGAAGCATTAG 1038 0.4056 MGLYEHSDVLQWGLNILNGDPGYNTGYYSDVIQDDTSDIYNGHYFQNNYEIDCNHVENDEIIARTLQEEFSQLEIDECSRYVQEGEGQSQAPETETETEPAYDWHNSAMVNYCPGGHDYEQEGIDDVEPSSSCSSPCETGESSLELTDNYPLDEVGSRLSEMILIPHVPKINGEIPSIDEATSDHQRLLDRLQVYDFVEHRVQGDGNCQFRALSDQLYNAPDHHKFVRRQVVNQLKSNPEIYGGYVPMEYDDYLGNMSKSGEWGDHVTLQAAADKYGVRIFVMTSFKDTCCIEILPNFEKPKGVIFLSFWAEVHYNSIYPQGDVASSDSRKKKRWWRRNSGNKKH* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1159 345 MobiDBLite consensus disorder prediction 125 144 - -
Lan5g1159 345 Gene3D - 178 326 - -
Lan5g1159 345 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 28 337 - -
Lan5g1159 345 Pfam OTU-like cysteine protease 203 289 IPR003323 -
Lan5g1159 345 MobiDBLite consensus disorder prediction 127 144 - -
Lan5g1159 345 SUPERFAMILY Cysteine proteinases 183 321 IPR038765 -
Lan5g1159 345 ProSiteProfiles OTU domain profile. 197 321 IPR003323 -
Lan5g1159 345 PANTHER OTU DOMAIN CONTAINING PROTEIN 28 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1159 Lan-Chr5 24874813 24880897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1159 - - aip:107648617 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1159 5 24874813 24880897 Lan19g0235 19 2434766 2440598 LSH
Lan5g1159 5 24874813 24880897 Lan11g1331 11 19967393 19972486 PCT