Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0235 ATGGTTTTCTTTGATCAATCAGATGTTATTCAGTGGGGTCTTCATATTCTCAATGGTGACCCTAGTTATAGTACTGAATACTATAACAACATAGATCAAGATGATAATAGTGACATCTATAATGGACCCTATTTCCAGAACCATCATGAAAATGATTCGAACGATGTAGAGAATGATGAGATTATTGCTCGTACTCTTCAAGAAGAGTTTTCACAGCTAGAGATTGATGAACGTTCGAGGAATGTACAGGAAGGTGAAGGACATGATTTGCATAACTCTGCAATGGGGAATTATTGTTCAGGAGGTCATGAATATGAACAAAAAGGAATTGATGACGTAGAACCTTCTAGTCCCGGTGAAACAGGGGAATCCTCATCAGAGCTAACTGATAATTCTACACATGATGATGAAGTAGGGAGGAGATTCAGTGACATGACACCAATCCCTCATGTTCCGAAAATTAACGGAGAAATTCCTTCAATTGATGAAGCAACATCAGATCATCAAAGACTTCAGGATAGATTGCAGTTATATGACTTTGTGGAGCACAAGGTAGAAGGTGATGGTAATTGTCAGTTCCGTGCACTCTCCGATCAATTGTATAATGCACCTGATCGCCACAAGTTTGTGAGACGACAAGTTGTGAACCAGCTCAAATCTAATCCCGAGATTTATGATGGATATGTTCCCATGGAATATGATGACTACTTGGCGAAGATGTCTAAGAGTGGAGAATGGGGTGATCATGTCACTCTTCAAGCAACTGCTGATAAGTATGGTGTGAAGATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATTCTTCCAAATTTTGAGAAGCCGAAAAGAGTGATTTTCCTAAGTTTTTGGGCAGAGGTGCATTACAATTCTATCCACCCTAGAGGAGATAAAGCTTCAAGTGAGTCAAGAAAGAAGGAATGGTGGTCTAGGAGCTTTGGAAGTAAGCATTAG 981 0.3965 MVFFDQSDVIQWGLHILNGDPSYSTEYYNNIDQDDNSDIYNGPYFQNHHENDSNDVENDEIIARTLQEEFSQLEIDERSRNVQEGEGHDLHNSAMGNYCSGGHEYEQKGIDDVEPSSPGETGESSSELTDNSTHDDEVGRRFSDMTPIPHVPKINGEIPSIDEATSDHQRLQDRLQLYDFVEHKVEGDGNCQFRALSDQLYNAPDRHKFVRRQVVNQLKSNPEIYDGYVPMEYDDYLAKMSKSGEWGDHVTLQATADKYGVKIFVMTSFKDTCCIEILPNFEKPKRVIFLSFWAEVHYNSIHPRGDKASSESRKKEWWSRSFGSKH* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0235 326 MobiDBLite consensus disorder prediction 129 143 - -
Lan19g0235 326 Pfam OTU-like cysteine protease 187 273 IPR003323 -
Lan19g0235 326 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 29 319 - -
Lan19g0235 326 Gene3D - 161 310 - -
Lan19g0235 326 SUPERFAMILY Cysteine proteinases 166 305 IPR038765 -
Lan19g0235 326 ProSiteProfiles OTU domain profile. 180 304 IPR003323 -
Lan19g0235 326 PANTHER OTU DOMAIN CONTAINING PROTEIN 29 319 - -
Lan19g0235 326 MobiDBLite consensus disorder prediction 81 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0235 Lan-Chr19 2434766 2440598 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0235 - - aip:107648617 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1159 5 24874813 24880897 Lan19g0235 19 2434766 2440598 LSH
Lan19g0235 19 2434766 2440598 Lan11g1331 11 19967393 19972486 PCT