Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1331 ATGTGTTTTATGGGCCACATGGCAACATATGACATAGATTCTGATGTTGTTCAATGGGGCCTTCATCTTCTTGATGTTTGCACTTTTTCCAATAGTGGTTCACCTAGTATCATAACTCAATATGATCCGGATTTAAGTCAAATACAATATGTTAGAGAAGGCTTCTCTCAACCTACGTATGTGGAGAATGACGAGGCTGTTGCACGCGCTTATCAAGAAGAATTGTCACGACTTGAGTCTATAGAGGCTTCTGGAAGATCCAATTATGATAATGAGAACCTGCGAGAATCTGTTCTTGCACAAGATTGGATTGCTTCGAATGGAAACTATAACTATGGCAATCAGTCTTGCCAGAACACCATAGACGAGCAGAACAATATGAAAGAAATGGAGAAGTATGCTCCAAGTGAAAGGGACAACAATGATCATGAAATTGAAGTTTTTGGGTCGTCATCCGAGTCAGGAGAGATACCTGTTACCAGTGATGATTTCAGGCGATCGTTGGAAGTATCAGATGAGTCTTCTCTTGATGGTGAAGTAGGCAAAAGACTGAACCAGATGATCCCGACTCGTCATACCCCTAAAATCAACGAAAAAATACCATCTGATGACGAAGAAATATCAGATCATGAAAGGCTGCTAGACAGACTGCAGTTATATGATGTGATTGAGCGTAAGGTTGAAGGAGATGGTAACTGCCAGTTTCGTTCTTTGTCAGATCAACTATATCGCTCTCCAGAGCACCACAAGTTTGTGCGGAAACAAATTATTCAACAGCTGGAGTCTTTCCCAGAACTATATTCTGGTTATGTTCCTATGGCTTATTTTGATTATTTGAAGAAGATGAGCAAGAGCGGCGAATGGGGCGACCATGTTACATTGCAGGCTGCTGCAGATTGTTATGGTGTCAAGATTTTTGTTATCACATCTTTTAAGGACACATGCTACATTGAGATTCTTCCACAAATACAGAAGTCTGGAAGAGTGATATTTCTGAGCTTTTGGGCAGAGGTGCATTACAACCCTATCTATCCTGAAGGAGGTGACATCTTTGTGCATTATGTACAAACAATGTAA 1077 0.4067 MCFMGHMATYDIDSDVVQWGLHLLDVCTFSNSGSPSIITQYDPDLSQIQYVREGFSQPTYVENDEAVARAYQEELSRLESIEASGRSNYDNENLRESVLAQDWIASNGNYNYGNQSCQNTIDEQNNMKEMEKYAPSERDNNDHEIEVFGSSSESGEIPVTSDDFRRSLEVSDESSLDGEVGKRLNQMIPTRHTPKINEKIPSDDEEISDHERLLDRLQLYDVIERKVEGDGNCQFRSLSDQLYRSPEHHKFVRKQIIQQLESFPELYSGYVPMAYFDYLKKMSKSGEWGDHVTLQAAADCYGVKIFVITSFKDTCYIEILPQIQKSGRVIFLSFWAEVHYNPIYPEGGDIFVHYVQTM* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1331 358 Coils Coil 61 81 - -
Lan11g1331 358 PANTHER OTU-LIKE CYSTEINE PROTEASE DOMAIN CONTAINING PROTEIN 28 347 - -
Lan11g1331 358 Gene3D - 203 350 - -
Lan11g1331 358 SUPERFAMILY Cysteine proteinases 205 345 IPR038765 -
Lan11g1331 358 Pfam OTU-like cysteine protease 229 314 IPR003323 -
Lan11g1331 358 ProSiteProfiles OTU domain profile. 222 346 IPR003323 -
Lan11g1331 358 PANTHER OTU DOMAIN CONTAINING PROTEIN 28 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1331 Lan-Chr11 19967393 19972486 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1331 - - gmx:100820379 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1159 5 24874813 24880897 Lan11g1331 11 19967393 19972486 PCT
Lan19g0235 19 2434766 2440598 Lan11g1331 11 19967393 19972486 PCT