Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1373 ATGGCTGTCACTTCTTCCAATCTCAATGCCCCAGAAAAGAAGCAATGGTGGCTCACCAACCGAAAGATTGTTGAGAAATATCTGAAAGATGCACGCAATCTCATTGCGACACAAGAAGAGAATGAGATCGCTTCGGCTTTGAATATTGTTGAAGCGGCTTTGGCTATTTATCCACGTTTAGAGCAAGCTCTTGAACTAAGAGCAAGGTCTCTTTTATATCTGAGAAGATTCAAAGAGGTAGCGGATATGCTTCAAGACTATATTCCTAGCCTGAAAATGGCGAACGATGACTCTGGTTCTGTTTCTTCAGATAGTTCTTCTCAGACACTTTCAAGGGAAGGTGTGAATCTTCTCTCGTACTCTGTTGAAAGGGATCAAAGTTTCAAATGCTTCTCTATTTCAGAATTGAAGAAAAAAGTCATGGCAGGACTCAGCAAAAATTACGAGAAAGAAGGGCATTGGAGATACTTGGTGTTGGGCAAAGCATGCTGCCACCTAGGACTAATGGAAGATGCAATGGTTCTTCTCCAAACCGGTAAACGCCTAGCCAGCGCCGCACACCGCCGTGAGAGTATATGTTGGTCCGACGACAGCTTTTCATTATCAACCATAAATATAAATTCACAACCCTCAACCCCACCACTAACCCCACTTACAGAGACCGAATCCATCACCCATCTACTTACACACATCAAACTCCTCCTACGGCGTCGCGCCTCCGCACTCGCCGCCCTTGACGCCGGTCTCCATTCAGAGGCCATCAGACACTTCTCAAAACTCCTTGATGGACGCCGTTTCGCTCCACAGGGCTTCCTCGCTGAATGCTACATGCACAGAGCCAATGCTTATCATTCTTCAGGTCGAATTGCAGAGTCTATAGGTGATTGCAACCGCACCCTAGCCTTAGACCCCACTTGCATCCAAGCTCTTGAAACCAGAGCATCCATTTTAGAAACAATTCGATGCTACACTGATTCACTGCACGACCTTGAACATTTGAAGCTCTTATACAACACAATCCTGCGTGATAAAAAGCTTCCAGGTCCCGCATGGAAGCGCCACAATGTGAGTTACAGGGAGATACCGGGGAAGTTGTGTGCACTCACTATAAAAATTCAAGAACTAAAGAAAAGGGTGGGTTCTGGTGAGGTTGGCAATGTTGATTACTATGTTCTGATTGGTTTAAGAAAAGGGTGTTCAAGATCTGAGTTGCAAAGGGCTCATCTATTGTTATGTTTGAAGCATAAACCCGATAAGGCTACGAATTTTATTGATCGTTGCGAGCTTGCGAATGAGCACGATCTCGAATCGGTTAAAGACAGGGCTAAGATGTCAGCATTGTTGTTGTATAGGTTGCTTCAAAAGGGTTATGCTAATGTGATGCATACAATTATGGATGAGGAGGCTGCTGAGAAACAAAATAATATAAAAGAAGCATTGGCTTTGCAATTGCAACAAGAAGCTGAAGAAGTGAATGAGAAAAAAATTGTAGAAAATAAGAATAAGTGTTTAATATCTTCTCCTTCTATTGTGGATTCATCAGTGTTTCAAGGTGTGTTTTGCCGTGATCTTTCTGTGGTTGGGGACTTGCTTTCACAAGTAGGATTTAACCGTCCAATTCCAATGAAGTATGAAGGTTTGAGTTGCTAA 1650 0.4333 MAVTSSNLNAPEKKQWWLTNRKIVEKYLKDARNLIATQEENEIASALNIVEAALAIYPRLEQALELRARSLLYLRRFKEVADMLQDYIPSLKMANDDSGSVSSDSSSQTLSREGVNLLSYSVERDQSFKCFSISELKKKVMAGLSKNYEKEGHWRYLVLGKACCHLGLMEDAMVLLQTGKRLASAAHRRESICWSDDSFSLSTININSQPSTPPLTPLTETESITHLLTHIKLLLRRRASALAALDAGLHSEAIRHFSKLLDGRRFAPQGFLAECYMHRANAYHSSGRIAESIGDCNRTLALDPTCIQALETRASILETIRCYTDSLHDLEHLKLLYNTILRDKKLPGPAWKRHNVSYREIPGKLCALTIKIQELKKRVGSGEVGNVDYYVLIGLRKGCSRSELQRAHLLLCLKHKPDKATNFIDRCELANEHDLESVKDRAKMSALLLYRLLQKGYANVMHTIMDEEAAEKQNNIKEALALQLQQEAEEVNEKKIVENKNKCLISSPSIVDSSVFQGVFCRDLSVVGDLLSQVGFNRPIPMKYEGLSC* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1373 549 Gene3D DnaJ domain 375 508 IPR036869 -
Lan4g1373 549 CDD DnaJ 388 422 IPR001623 -
Lan4g1373 549 PANTHER - 1 549 - -
Lan4g1373 549 Coils Coil 467 501 - -
Lan4g1373 549 Gene3D Tetratricopeptide repeat domain 216 346 IPR011990 GO:0005515
Lan4g1373 549 SUPERFAMILY Chaperone J-domain 384 422 IPR036869 -
Lan4g1373 549 SMART tpr_5 273 306 IPR019734 GO:0005515
Lan4g1373 549 SMART tpr_5 153 186 IPR019734 GO:0005515
Lan4g1373 549 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 549 - -
Lan4g1373 549 SUPERFAMILY TPR-like 240 334 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1373 Lan-Chr4 22716878 22720843 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1373 - - gmx:106797171 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1373 4 22716878 22720843 Lan4g1373 4 22716878 22720843 ECH
Lan20g0535 20 3993074 4004486 Lan4g1373 4 22716878 22720843 LSH
Lan4g0950 4 11982308 11985229 Lan4g1373 4 22716878 22720843 PCT
Lan4g1373 4 22716878 22720843 Lan4g0950 4 11982308 11985229 PCT