Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0950 ATGGCTGTCACTACTCCCTCTCTATCTCCTTCAGAAAAGAAACATTGGTGGCTCACCAACAGAAAGATTGTTGTGAAATATGTAAAAGATGCTAGGACCCTGATTGCAACACAAGAACAAAGTGAGATTGTTTCAGCTTTGAACCTTCTTGATGCAGCTCTAGCTATTTCGCCACGGTTGGATCAAGCTATTGAACTTAGAGCAAGGTCTTTGCTTTATTTGCGACGGTTTAAAGAGGTTGCTGATATGCTTCAGGATTATATTCCAAGTTTGAGAATGGCAAATGATGATTCAAGCTATGTTTCTTCTGATAGCTCCTCTCAGAAGCTTCTATCTTCTTCTTCTTCTTCTGAGTCACTAGAGAAGGATCAGATTTTCAAGTGTTTTTCTGTTTCTGATCTCAAGAACAAGGTTATGGCAGGGATTAGTAAAAGTTGCAACAAAGAAGGGCAATGGAGATACTTGGTTTTGGGTCAAGCATGCTGCCATCTTGGCCTAATGGAGGATGCAATGGTCCTTCTCCAAACAGGGAAACGTCTTGCATCTGCCGCATTTCGCCGTGAGAGTGTGTGCTGGTCCGATGACAGCTTCTCTCTATCAACTATCCCTTTCGCCGGAGACACAACAAACCGGCCACCTCCACCCTCCACTCCACCTCGTGCACCATTCGCAGAATCTGAAAACATCAACAACCTCCTCGCCCAAATCAAATTCCTCCTCCGCCGTCGCACCGCTGCCCTCGCAGCACTCGATGCCGGCCTTTACTCAGAGGCCATCCGCCACTTCTCCAAAATCCTTGATGGCCGCCGTGGTGCCCCTCAGGGCTTCCTTGCTGAGTGCTACATGCACAGAGCCTCAGCCTACCGCTCTTCTGGTCGAATCGCAGAGTCTATAGCCGATTGTAACCGTACCTTAGCCCTCGACCCTACTTGCATTCAAGCCCTTGACACCAGAGCTTCCCTCTTCGAAACCATTCGATGCTTACCCGACTCTCTGCACGATCTTGAACACTTGAAGCTCCTGTACAATGCAATCTTGCGTGATCGCAAGCTTCCAGGCCCTGCATGGAAACGTCACAATGTGCGGTACCGGGAAATTCCCAGTAAACTTTGTGCCTTAAACACCAAGATTCAAGAATTGAAGTCCAGGTTGGCTTCTGGTGAGAGTGGAAATGTGGATTACTATGCATTGATTGGAGTAAGAAGAGGGTGTTCACGATCCGAGTTAGAGAGGGCTCATGTGTTACTTACTTTAAGGCACAAGCCTGATAAAGCTACTAACTTTATCGATCGATGTGAGCTCGTGAACACGCGTGATCTCGAAACGGTGAAGGAAAGAGCAAAGATGTCAGCATTGTTGCTATATAGATTGGTTCAGAAAGGTTACACAAGTTTGATGAGTACTATAATGGATGAGGAAGCCGCTGAGAAACAAAGGAAGAAGGCTTTACAAGTTGCTGCACAAGCAATTCAAGTTCCGAAAACAAACCAACATGAGATGATGAATAATAAAGAAGATAAATTGGTGACTAATAGAAGCAGCAACAACAATGTTTCAGTGGAAAATAAAACTACTATAACTTCTACTACTGTGAATCCGGCAGTTTTCCAAGGTGTTTTTTGCCGCGATCTCACGGTGGTTGGGAACTTGCTTTCACAGGTGGGGTTCAATAGACCAATTCCAATGAAGTATGAAGCATTGAGCTGCTAA 1710 0.4556 MAVTTPSLSPSEKKHWWLTNRKIVVKYVKDARTLIATQEQSEIVSALNLLDAALAISPRLDQAIELRARSLLYLRRFKEVADMLQDYIPSLRMANDDSSYVSSDSSSQKLLSSSSSSESLEKDQIFKCFSVSDLKNKVMAGISKSCNKEGQWRYLVLGQACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLSTIPFAGDTTNRPPPPSTPPRAPFAESENINNLLAQIKFLLRRRTAALAALDAGLYSEAIRHFSKILDGRRGAPQGFLAECYMHRASAYRSSGRIAESIADCNRTLALDPTCIQALDTRASLFETIRCLPDSLHDLEHLKLLYNAILRDRKLPGPAWKRHNVRYREIPSKLCALNTKIQELKSRLASGESGNVDYYALIGVRRGCSRSELERAHVLLTLRHKPDKATNFIDRCELVNTRDLETVKERAKMSALLLYRLVQKGYTSLMSTIMDEEAAEKQRKKALQVAAQAIQVPKTNQHEMMNNKEDKLVTNRSSNNNVSVENKTTITSTTVNPAVFQGVFCRDLTVVGNLLSQVGFNRPIPMKYEALSC* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0950 569 MobiDBLite consensus disorder prediction 203 224 - -
Lan4g0950 569 SUPERFAMILY TPR-like 245 338 IPR011990 GO:0005515
Lan4g0950 569 Gene3D Tetratricopeptide repeat domain 31 508 IPR011990 GO:0005515
Lan4g0950 569 PANTHER - 1 569 - -
Lan4g0950 569 SMART tpr_5 278 311 IPR019734 GO:0005515
Lan4g0950 569 SUPERFAMILY Chaperone J-domain 389 427 IPR036869 -
Lan4g0950 569 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 569 - -
Lan4g0950 569 CDD DnaJ 393 427 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0950 Lan-Chr4 11982308 11985229 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0950 - - gmx:100808420 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0950 4 11982308 11985229 Lan20g0535 20 3993074 4004486 PCT
Lan4g0950 4 11982308 11985229 Lan4g1373 4 22716878 22720843 PCT
Lan20g0535 20 3993074 4004486 Lan4g0950 4 11982308 11985229 PCT
Lan4g1373 4 22716878 22720843 Lan4g0950 4 11982308 11985229 PCT