Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1318 ATGGCTCTAGTTTCAGAAGAGATCAAAGCAAGATCAGAAATGTACCATGGAGATGAAATGGGTCAAATAAAATCCAAGGAACTTCTCAAAGAAGTAGGGTTACCCAATGGTCTTTTACCATTGAAAGACATTGAAGAATGTGGCTATGACAGAGAGAGTGGTTTTGTGTGGCTGATTCAGAAGAAGAGTTCAACTCACAAGTTTCATAAAGTTGGAAAGCTTGTGTCTTATGCACCTGAAGTCACTGCCACTGTTGAGTTTGGCAAGATCAAGAAACTCACTGGTGTGAAGGTAAAAGAGCTTATGGTTTGGCTCCAACTTAATGAAATTTGTTTGAATGATCCACCAAGTGGAAAAATCACTTTCAAGGCTCCTTCTGGGCTTTTCAGAACTTTCCCAGTTTCAGCTTTTGAGATTGAAGAGAAAGAAGCTGAGAAGGGAAAGTTGGAAGTGAAAGAAGCTGGTGGAGCTGTTGAAGTTAAAGAAGTTTGA 492 0.3984 MALVSEEIKARSEMYHGDEMGQIKSKELLKEVGLPNGLLPLKDIEECGYDRESGFVWLIQKKSSTHKFHKVGKLVSYAPEVTATVEFGKIKKLTGVKVKELMVWLQLNEICLNDPPSGKITFKAPSGLFRTFPVSAFEIEEKEAEKGKLEVKEAGGAVEVKEV* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1318 163 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Lan4g1318 163 SUPERFAMILY At5g01610-like 4 143 IPR036758 -
Lan4g1318 163 Gene3D - 6 149 IPR036758 -
Lan4g1318 163 PANTHER PLANT/F25P12-18 PROTEIN 2 157 - -
Lan4g1318 163 PANTHER T31J12.3 PROTEIN-RELATED 2 157 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1318 Lan-Chr4 21995693 21996487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1318 - - vra:106757663 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1318 4 21995693 21996487 Lan4g1318 4 21995693 21996487 ECH
Lan8g0355 8 5703567 5704413 Lan4g1318 4 21995693 21996487 LSH
Lan20g0610 20 4816983 4817942 Lan4g1318 4 21995693 21996487 LSH
Lan4g0912 4 11131205 11131873 Lan4g1318 4 21995693 21996487 PCT
Lan16g1012 16 17311673 17312467 Lan4g1318 4 21995693 21996487 PCT
Lan4g1318 4 21995693 21996487 Lan4g0912 4 11131205 11131873 PCT
Lan4g1318 4 21995693 21996487 Lan16g1012 16 17311673 17312467 PCT