Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0610 ATGTCTTTGGTGATCCCAGATGAGGTAAAAGCCAGAGCAGAGATATACCATGGAGATGAACTTGGCCAAGCAAAGTCCAAGGAACTTCTTGCTGAAGTGGGGCTACCCAATGGACTTTTGCCATTGAAAGACATTGAAGAATGTGGTTATGATAGGGAGAGTGGTTTTGTGTGGCTGATTCAGAAGAAAAGCTCAACTCACAAGTTTCAGAAGATTGATAGGTTGGCCACCTATGCACCTCATGTAACTGCCACTGTTGAGTTTGGTAAGATCAAGAAGCTCACTGGTGTGAAGGTCAAGGAGCTTTTGGTTTGGCTCACACTCAATGAAATCTTTCTTGATGAAGCAAACAGTAACCAGATAACATTCAAGTCCTTTGCTGGGATTTCCAGGACATTCCCAGTGTCAGCTTTTGTGATTGATGAGAGCTATGTTGCTGAGGGTGAGGATGAAAATGTGGAAGTGGAAGATGCAGTTGAAGCTGTTGAAGTCAAATAA 498 0.4317 MSLVIPDEVKARAEIYHGDELGQAKSKELLAEVGLPNGLLPLKDIEECGYDRESGFVWLIQKKSSTHKFQKIDRLATYAPHVTATVEFGKIKKLTGVKVKELLVWLTLNEIFLDEANSNQITFKSFAGISRTFPVSAFVIDESYVAEGEDENVEVEDAVEAVEVK* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0610 165 PANTHER PLANT/F25P12-18 PROTEIN 4 159 - -
Lan20g0610 165 Pfam Protein of unknown function, DUF538 27 138 IPR007493 -
Lan20g0610 165 Gene3D - 8 148 IPR036758 -
Lan20g0610 165 Coils Coil 145 165 - -
Lan20g0610 165 SUPERFAMILY At5g01610-like 7 142 IPR036758 -
Lan20g0610 165 PANTHER T31J12.3 PROTEIN-RELATED 4 159 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0610 Lan-Chr20 4816983 4817942 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0610 - - gmx:100500427 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0355 8 5703567 5704413 Lan20g0610 20 4816983 4817942 LSH
Lan20g0610 20 4816983 4817942 Lan4g1318 4 21995693 21996487 LSH
Lan4g0912 4 11131205 11131873 Lan20g0610 20 4816983 4817942 PCT
Lan16g1012 16 17311673 17312467 Lan20g0610 20 4816983 4817942 PCT
Lan20g0610 20 4816983 4817942 Lan4g0912 4 11131205 11131873 PCT
Lan20g0610 20 4816983 4817942 Lan16g1012 16 17311673 17312467 PCT