Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1012 ATGCTGGTAACAGAAGAAATGAAGGCAAAGGCAGAGGTATATTATGGTGACAAAGTTTGCAGGGAGAAATTCTCTCTGTTACTTTCAGAGATAGGTTTACCAGATGGGTTATTAACCTTACAAGACATTGAAGAATGTGGGTATGTGAAAGACATAGGCTTTGTTTGGCTCAAGCTTCAAAAGAAGAGGGAACACAGGTTTGATAACATACTTGTTTGTTATGACTCAGTGGTCACTGCCTATGTGGAACCAAACAAGATTAAGAATCTTACTGGTGTTAAGGCTAGGGACTTTTTGATTTGGTTCAATTTGACTGAAATTTATGTGAAAGGTTCACCAAAGGAGTCTATGATTACATTCAAATCTATTGTTGGATTGTCTATGTCTTTTCCAGTGTCTTTGTTCAAAGGTGGCAAGGAAAAGATAAGTGGTGAATCAAAGGCCATGGTATAA 453 0.3753 MLVTEEMKAKAEVYYGDKVCREKFSLLLSEIGLPDGLLTLQDIEECGYVKDIGFVWLKLQKKREHRFDNILVCYDSVVTAYVEPNKIKNLTGVKARDFLIWFNLTEIYVKGSPKESMITFKSIVGLSMSFPVSLFKGGKEKISGESKAMV* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1012 150 Pfam Protein of unknown function, DUF538 27 136 IPR007493 -
Lan16g1012 150 Gene3D - 4 145 IPR036758 -
Lan16g1012 150 PANTHER SIMILARITY TO UNKNOWN PROTEIN 2 147 - -
Lan16g1012 150 PANTHER T31J12.3 PROTEIN-RELATED 2 147 IPR007493 -
Lan16g1012 150 SUPERFAMILY At5g01610-like 3 137 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1012 Lan-Chr16 17311673 17312467 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1012 - - gmx:100784975 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0912 4 11131205 11131873 Lan16g1012 16 17311673 17312467 LSH
Lan16g1012 16 17311673 17312467 Lan8g0355 8 5703567 5704413 PCT
Lan16g1012 16 17311673 17312467 Lan20g0610 20 4816983 4817942 PCT
Lan16g1012 16 17311673 17312467 Lan4g1318 4 21995693 21996487 PCT
Lan8g0355 8 5703567 5704413 Lan16g1012 16 17311673 17312467 PCT
Lan20g0610 20 4816983 4817942 Lan16g1012 16 17311673 17312467 PCT
Lan4g1318 4 21995693 21996487 Lan16g1012 16 17311673 17312467 PCT