Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0145 ATGGTTGATTTTCACTATAACTCAAACATGCCAACAACCAAAGACACTTCTTCTAAGCCCCCCAAAATCTCTCTATCTAATAACCCCTCACTACCCTCTCTACAAACCTTCTGCACCAGCGACATCTCCGCCGCATCGCCGCCACTCTGCTCCGCTTACGAGCACTACCTCTGCCTCCCTGAGCTCATAAATCTCTGGACTTCCAGAGACTTTCCAAACTGGAACAACGAACCGGTTCTCAAACCCGCGTTGCAAGCTCTCGAAATCACGTTCCGGTTCATCTCAACCGTTTTCTCAGACCCTAGACCGTACGCGAACTGTAGAGAACTGAACCGTAGGGTCGAGTCACTCGCCATGTCACAGATCGAAATCATTGCTATGCTATGCGAGGATGAGGAACATTACGCGAAGACACGTGGCACTGCTCCAACCCTCGACCTCGCCAATCAGAACCTGAGAAGATGCTATAGTGAAACTAGCTTACTCCCTCGTCTCGCCACGTGGCAGAAAACAAAACCCGCAGCGCAGAGGATCCTTCTCTCCATCGAACGCGCCATGATGAGGTGTCCTTATACGTTGGGATTAGGTGAACCAAATCTCGCAATGAAACCGAGTCTCCAATACGACGCCGTATGCAAACCAAACGAGGTTCATCTCCACGCGCTGAATACCAAAACAACACCGTCACAGGAGAGCCTTACTGTGCACGCGACGCACCAGATCGTAGAATCATGGATCCAGGTTTTACGGAAGCTTCTAGAAAGAATAACCGAATCGTTGGATAACAGAAAGTTCAATTTAGCCACAAGTGATTGTTACACGGTGGAACGAATCTGGAAGATTCTAACGGAAATAGAAGACATTCACATGGTTACGGACCCTGACGATTTTCTTAAAATAAAAAAAGAGTTAATTTCTATGAAAGGTGAAGCGGCGGCGTTTTGCTTCAGATCGAAGGGGTTAGTAGAGGTAACGAATATGTGTAGGGAATTGAAGCAGAAGGTGCCGTGTATATTGGAAGTGGAGGTGGACCCCATGGGTGGGCCCGGGGTAATGGAAGCAGCGATGAAAGTGTATGTGGAGAAAGAAAGTGGGTTCGAGAAGGTTCATGTGTTACAAGCGATGCAGGTGATTGAGGTGGCGATGAAGCGGTTTTATTATTGTTATAAACAGGTTATGGTGGTGGTTATGGGGAGTGCGGTGGTGAGTGGGAACCGAGTTTGTGAAGGAGGTGACTCGTTGAGTCAGATATTTTTGGAACCTACTTATTTTCCGAGTTTGGATGCAGCTAAGACATTTCTTGGGTATTTTTGGGAAAATGATAAACGTGGTGATAATAGATGTATTCGGTTCTAG 1356 0.4712 MVDFHYNSNMPTTKDTSSKPPKISLSNNPSLPSLQTFCTSDISAASPPLCSAYEHYLCLPELINLWTSRDFPNWNNEPVLKPALQALEITFRFISTVFSDPRPYANCRELNRRVESLAMSQIEIIAMLCEDEEHYAKTRGTAPTLDLANQNLRRCYSETSLLPRLATWQKTKPAAQRILLSIERAMMRCPYTLGLGEPNLAMKPSLQYDAVCKPNEVHLHALNTKTTPSQESLTVHATHQIVESWIQVLRKLLERITESLDNRKFNLATSDCYTVERIWKILTEIEDIHMVTDPDDFLKIKKELISMKGEAAAFCFRSKGLVEVTNMCRELKQKVPCILEVEVDPMGGPGVMEAAMKVYVEKESGFEKVHVLQAMQVIEVAMKRFYYCYKQVMVVVMGSAVVSGNRVCEGGDSLSQIFLEPTYFPSLDAAKTFLGYFWENDKRGDNRCIRF* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0145 451 MobiDBLite consensus disorder prediction 1 25 - -
Lan4g0145 451 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 220 434 IPR037217 GO:0019441|GO:0020037|GO:0046872
Lan4g0145 451 Gene3D - 208 337 - -
Lan4g0145 451 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 446 IPR038759 -
Lan4g0145 451 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 446 - -
Lan4g0145 451 Pfam Hs1pro-1 N-terminus 1 183 IPR009869 GO:0006952
Lan4g0145 451 Pfam Hs1pro-1 protein C-terminus 186 440 IPR009743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0145 Lan-Chr4 2313640 2315226 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0145 - - gsj:114396435 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0145 4 2313640 2315226 Lan16g0692 16 9339940 9341550 LSH
Lan4g0145 4 2313640 2315226 Lan11g0249 11 1595278 1596903 PCT
Lan11g0249 11 1595278 1596903 Lan4g0145 4 2313640 2315226 PCT