Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0692 ATGATTGATTTTCACTCCAACTCAGATATGGCAACCTCCAAGCCACTAAAAATCTCTCTATCCAATAACCTCTCGCTTCCTTCTATACAACAACACCAACCCTTCTGCTCCAGCGACATCTCCGCCGCATCGCTGCCCCTATGCTCCGCCTACGACCACTACCTCCGCCTCCCGGAACTCAGAAAGCTCTGGACTTCCAGAGACTTCCCAAATTGGAACAACGAGCCTGTCCTCAAACCCGCCTTGCAAGCTCTTGAAATCACATTCCGGTTCATGTCAACCGTTTTTTCAGACCCCAGACCGTACGCGAACCGGAGAGAACTGAACCGTAGGGTCGAGTCACTCGCCACGTCACAGATCGAAATCATTGCCATGCTCTGCGAAGACGAGGAACATAACTCAATGACACGTGGCACTGCTCCAACGCTAAACCTTGAGACTCAGCAGAACCTGAACCAGAGAAGAAGCTATAGCGAAACTAGCTTGCTTCCTCATCTCGCCACGTGGCATAAATCAAAACCCGCAGCGCAGAGGATCCTTCTCTCCGTCGAATGCGCAATGATGAGGTGTCCTTATACTTTGGGATTGGGTGAACCGAATCTCGCTATGAAACCAAGTCTCCAATACGACGCCGTTTGTAAACCAAACGAGCTTCACGTTCACGCTCACGCTCTCGTATCTAAAACAGAGGAGAGTCTTACGGTGCACGCGACGCACCAGATCATAGAGTCATGGATCCAAGCGTCACAGAAGCTTCTAGAAAGAATCAACAAATTATTAGATAATAAAATATTAGAAAAAGCCACGAGGGATTGTTACGCAGTAGAGAGAATCTGGAAGCTTCTAACGGAGATAGAAGACATGCATGTTATAATGGACCCTGACGATTTTCTGAAAATAAAAAAGGAGTTAAATTCAGTTAAGGGTGAAACGGCAGCGTTTTGCTTCAGATCGAAAGGGGTGGTGGAAGTTACGAATATGTGTAGGGAATTGAAACAGAAGGTGCCGGGAATATTGGAAGTGGAAGTGGACCCCAGGGGTGGGCCCGGGGTAATGGAAGCAGCGATGAAGGTTTATGTGGAAAAGGAAAGTGGGTTCGAGAAGGTTCATGTGTTGCAAGCGATGCAAGCAATTGAGGTTGCTATGAAGAGGTTTTTCTATGCTTATAAACAGGTTTTGGTGGTTGTTATGGGAAGTGCTGAAGCGAGTGGGAACCGAGTTAGTGAAGGGGTTGGTGACTCGTTGAGTCAGATATTTATGGAACCTGCTTATTTTCCGAGTTTGGATGCGGCTAAGACGTTTCTAGGGTATTATTGGGAAAATGATAGTCGTGGTGGTTTGAAAACTTAG 1350 0.4704 MIDFHSNSDMATSKPLKISLSNNLSLPSIQQHQPFCSSDISAASLPLCSAYDHYLRLPELRKLWTSRDFPNWNNEPVLKPALQALEITFRFMSTVFSDPRPYANRRELNRRVESLATSQIEIIAMLCEDEEHNSMTRGTAPTLNLETQQNLNQRRSYSETSLLPHLATWHKSKPAAQRILLSVECAMMRCPYTLGLGEPNLAMKPSLQYDAVCKPNELHVHAHALVSKTEESLTVHATHQIIESWIQASQKLLERINKLLDNKILEKATRDCYAVERIWKLLTEIEDMHVIMDPDDFLKIKKELNSVKGETAAFCFRSKGVVEVTNMCRELKQKVPGILEVEVDPRGGPGVMEAAMKVYVEKESGFEKVHVLQAMQAIEVAMKRFFYAYKQVLVVVMGSAEASGNRVSEGVGDSLSQIFMEPAYFPSLDAAKTFLGYYWENDSRGGLKT* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0692 449 Coils Coil 242 262 - -
Lan16g0692 449 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 7 443 - -
Lan16g0692 449 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 7 443 IPR038759 -
Lan16g0692 449 Gene3D - 207 336 - -
Lan16g0692 449 Pfam Hs1pro-1 protein C-terminus 187 441 IPR009743 -
Lan16g0692 449 Pfam Hs1pro-1 N-terminus 1 184 IPR009869 GO:0006952
Lan16g0692 449 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 226 435 IPR037217 GO:0019441|GO:0020037|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0692 Lan-Chr16 9339940 9341550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0692 - - gsj:114396435 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0145 4 2313640 2315226 Lan16g0692 16 9339940 9341550 LSH
Lan16g0692 16 9339940 9341550 Lan11g0249 11 1595278 1596903 PCT
Lan11g0249 11 1595278 1596903 Lan16g0692 16 9339940 9341550 PCT