Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0249 ATGGTTGATTTACACTGGAAATCAAACATACTCAATTCCAACGTATCCCCAAAATCCTCAAAAATCTCCTTATCCGATTCACCAATCCCCAAACTACCCCCCTTACCCACTTTGCAACAACCAATTAAAAACGACATCTCTCCTGCGTCGTTTAAGGTTTGCACTGCATACGAAAACTACCTTCGCCTTCCTCACCTTAGAAAACTTTGGGCCTCTAACGACTTCCCAAACTGGGCCAACGAGCCCGTTTTAAAACCAGCCTTTCACGCTCTCGAGATCACGTTCCGGTTCATCTCGACCGTTTTATCGGATCCTAGACCGTACTTGAACCGGCGCGAGTTTACCCGTAGGCTCGAGTCGCTCGCCACGTTTCAGGTTCAGATCATCGCCATGCTCTGCGAAGACGAGGAACAAAACCCCGAGCCACGTGGCACTGCACCGGTTATCGACGTAAATAGTTTTGGGAATAGTAGGAGTTACAGTGAAGCTAGTTTTCTTTCGAGGATTGCCAGCTGGCATAAATCTAGGGACGTGGCGCAGAGGATTCTGTTCTCTGTGGAACGAGAGATGAGTAGGTGTTCGTACACGCTTGGTTTGGGAGAAGCGAACCTCGCCGGAAAACCGATCCTCCGATACGACGCCGTTTGTAAACCTAATGAGTTACATGCTTTAGAAACGACGTTGGTGGAGCACGTAGAGAACTACGAGAATGTAACTTTGCAATCGACGCACCAGATATTGGAGTCATGGTCACGCGTCTCGCGCGTGTTGCTTGAGAGAGTGAATGATTCCATCGATTGTAGAAATTTCGGGAAGGCTTCGATGGATTGTTATGCAGTGGAGAGGATCTGGAAGCTTCTGACGGAGGTTGAAGATCTTCATTTAATGATAGATCCTGACGATTTTTTGAAATTGAAGAAGGAGCTCGGGATTCGACCATGCGGTGAAACGGTGCCGTTTTGCCTTCGATCGAAGGAACTCGTGGAGATGGCAAATATGTGTAAGGATTTAAGGAAGAAGGTGCCGATGATATTAGAGGTGGAAGTGGACCTGAAGGGTGGGCCAGGGATGGTGGAGGCAGCGATGAAGGTTTACGTTGAGAAAAGGAGTGAGTTCGAGAAGGTGCATGTGCTTCAGGCGATGCAGGCGATTGAAACGGCGATGAAGAGGTTCTTCTACGCGTACAACCAGGTAGTTGCGGTGGTTATGGGGAGCGCGGAGGCTAATGGGAACCGGTTTGACTCGTTGACTCAGATATTCCTTGAACCTACGTATTTCCCCAGCTTGGATGCTGCTAAGACGTTTCTGGGGTATTATTGGGATAACAATAATAATTAA 1338 0.4813 MVDLHWKSNILNSNVSPKSSKISLSDSPIPKLPPLPTLQQPIKNDISPASFKVCTAYENYLRLPHLRKLWASNDFPNWANEPVLKPAFHALEITFRFISTVLSDPRPYLNRREFTRRLESLATFQVQIIAMLCEDEEQNPEPRGTAPVIDVNSFGNSRSYSEASFLSRIASWHKSRDVAQRILFSVEREMSRCSYTLGLGEANLAGKPILRYDAVCKPNELHALETTLVEHVENYENVTLQSTHQILESWSRVSRVLLERVNDSIDCRNFGKASMDCYAVERIWKLLTEVEDLHLMIDPDDFLKLKKELGIRPCGETVPFCLRSKELVEMANMCKDLRKKVPMILEVEVDLKGGPGMVEAAMKVYVEKRSEFEKVHVLQAMQAIETAMKRFFYAYNQVVAVVMGSAEANGNRFDSLTQIFLEPTYFPSLDAAKTFLGYYWDNNNN* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0249 445 Pfam Hs1pro-1 N-terminus 1 187 IPR009869 GO:0006952
Lan11g0249 445 Pfam Hs1pro-1 protein C-terminus 190 442 IPR009743 -
Lan11g0249 445 Gene3D - 212 312 - -
Lan11g0249 445 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 445 - -
Lan11g0249 445 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 212 436 IPR037217 GO:0019441|GO:0020037|GO:0046872
Lan11g0249 445 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 445 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0249 Lan-Chr11 1595278 1596903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0249 - - gsj:114396435 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0249 11 1595278 1596903 Lan11g0249 11 1595278 1596903 ECH
Lan4g0145 4 2313640 2315226 Lan11g0249 11 1595278 1596903 PCT
Lan16g0692 16 9339940 9341550 Lan11g0249 11 1595278 1596903 PCT
Lan11g0249 11 1595278 1596903 Lan4g0145 4 2313640 2315226 PCT
Lan11g0249 11 1595278 1596903 Lan16g0692 16 9339940 9341550 PCT