Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1719 ATGTTGTGTCATCGGATACCAATTCATAAGAAGAAAAAACCCGGTTTATTTTTGGTTTATTTGAATGTATATGATCTTACTCCCATTAATGGTTATGCTTATTGGCTTGGCCTTGGTGTTTTCCATTCAGGTGTTCAAGTTCATGATGTGGAATATGGATTTGGAGCACATGAAAGAAACACAACAGGGATTTTTGTAGTGGAACCTAGAAATTGTCCTGGATTCACATTCAGAAAATCAATATTAATTGGAAGTACAAATATGAACCCAAAGGATGTTAGAATATTGATGGAAAAGCTAGCTGAAGAGTATTCAGGGAACACATATCATCTTATACAAAAGAATTGCAATCACTTTTGTAGAGATTTTTGTCTCAAATTAACAGGAAAATCAATACCTCCATGGGTCAATCGACTTGCTAGACTTGGTTATTTGTGCAACTGTGTTCTTCCACAAAGCCTAAATGAGAAGAAGATTAGTAAAGTTTCATCTGATAGAATGAGAGAAGATGAAAAGAAGAAAATTAGAAGCCAATCTAGTAGCAGATATGAGGTTGATTCCTCTAATAAACCACTATCTAGTAGCCAAACAAGACATTGTGTTTCTCCACCTTCATCTATTATTATCAATGTTTCTTCAACCACAACCATTGTAGTAAAGTGA 663 0.3439 MLCHRIPIHKKKKPGLFLVYLNVYDLTPINGYAYWLGLGVFHSGVQVHDVEYGFGAHERNTTGIFVVEPRNCPGFTFRKSILIGSTNMNPKDVRILMEKLAEEYSGNTYHLIQKNCNHFCRDFCLKLTGKSIPPWVNRLARLGYLCNCVLPQSLNEKKISKVSSDRMREDEKKKIRSQSSSRYEVDSSNKPLSSSQTRHCVSPPSSIIINVSSTTTIVVK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1719 220 Gene3D PPPDE domains 15 172 IPR042266 -
Lan3g1719 220 PANTHER DESUMOYLATING ISOPEPTIDASE 3 217 IPR008580 GO:0008233
Lan3g1719 220 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Lan3g1719 220 MobiDBLite consensus disorder prediction 160 180 - -
Lan3g1719 220 MobiDBLite consensus disorder prediction 160 201 - -
Lan3g1719 220 Pfam PPPDE putative peptidase domain 19 152 IPR008580 GO:0008233
Lan3g1719 220 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 3 217 - -
Lan3g1719 220 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Lan3g1719 220 MobiDBLite consensus disorder prediction 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1719 Lan-Chr3 29716359 29718520 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1719 K22763 - gmx:100786432 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1719 3 29716359 29718520 Lan15g1053 15 19563264 19564653 PCT
Lan3g1719 3 29716359 29718520 Lan14g0824 14 15036948 15038654 PCT
Lan3g1719 3 29716359 29718520 Lan3g1101 3 23357453 23359566 PCT
Lan15g1053 15 19563264 19564653 Lan3g1719 3 29716359 29718520 PCT
Lan14g0824 14 15036948 15038654 Lan3g1719 3 29716359 29718520 PCT
Lan3g1101 3 23357453 23359566 Lan3g1719 3 29716359 29718520 PCT