Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1053 ATGCTGTGCAAACTGGTAGCGGTACAACCAAAGAAGAAGCGTGGCACCGTTCCGGTTTACCTCAATGTTTATGATCTCACTCCCATCAATGGCTATGCCTATTGGTTTGGCCTTGGAGTCTATCATTCTGGAGTTCAAGTTCATGGTATTGAATATGGTTTTGGGGCGCATGAACATAACACAAGTGGAATTTTTGAAGTGCAACCAAAACACTGTCCTGGGTTCAGTTTCAGAAAATCAATTTTGATTGGAACAACAGATCTAGGAGAGAAAGAAGTTCCAGCATTTATGGAGAAACTAGCCCAAGAGTATTGTGGGAACACCTATCATCTCATCATAAAAAACTGCAACCACTTCTGTTGTGATGTTTGTCTCAAATTAACAGGAAAATCAATCCCTCGATGGGTGAATCGACTTGCTAGACTTGGTCTTCTCTGCAATTGTGTTCTTCCCCCTGGGCTAAATGACACAAAAGTTCGTCAAGTTAAATTAGACAAGGTTCATGAAGGAGAGAAAAAGAAAACAAGAAACCAGTCCAAAAGGTATGAGGCTTCTTACAATCCTACATTGTTGTCTGGCCCTCAAGTTTCAGCAATTAAAAATAGGAGCCAAAGACATTGCCTTCTTCCATCTTCATCTTTGATTAATGCTTCTTCAACCTCAACCTTAACAGTGAAGTAA 681 0.4038 MLCKLVAVQPKKKRGTVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGIEYGFGAHEHNTSGIFEVQPKHCPGFSFRKSILIGTTDLGEKEVPAFMEKLAQEYCGNTYHLIIKNCNHFCCDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNDTKVRQVKLDKVHEGEKKKTRNQSKRYEASYNPTLLSGPQVSAIKNRSQRHCLLPSSSLINASSTSTLTVK* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1053 226 Gene3D PPPDE domains 12 174 IPR042266 -
Lan15g1053 226 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
Lan15g1053 226 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Lan15g1053 226 PANTHER DESUMOYLATING ISOPEPTIDASE 2 224 IPR008580 GO:0008233
Lan15g1053 226 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Lan15g1053 226 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1053 Lan-Chr15 19563264 19564653 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1053 K22763 - gmx:100306675 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1053 15 19563264 19564653 Lan14g0824 14 15036948 15038654 LSH
Lan15g1053 15 19563264 19564653 Lan3g1101 3 23357453 23359566 LSH
Lan3g1719 3 29716359 29718520 Lan15g1053 15 19563264 19564653 PCT
Lan15g1053 15 19563264 19564653 Lan3g1719 3 29716359 29718520 PCT