Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0824 ATGTTGTGTAATAAACTGGTTATGGTGCCAAGGAAGAAGAACCGTGGCACTGTTCCTGTTTATCTCAATGTTTATGATCTCACTACTATCAATGGCTATGCCTATTGGTTTGGCCTTGGAGTTTATCATTCTGGAGTTCAAGTTCATGGTATTGAATATGGTTTTGGAGCACATGAACATGACACAACTGGAATTTTTGAAGTGCAACCGAAAAACTGTCCCGGGTTCACTTTCAGAAAATCAATTTTCATTGGAACAACAGATCTAGGACAAAAAGAGGTTCAGGAATTTATGGAGAAACTAGCTCAAAATTACTCTGGGAAAACATATCAGATCATCTTAAAAAACTGCAACCATTTCTGTAATGATGTTTGTCTCAAATTAACAGGAAAATCAATCCCGCGATGGGTGAATCGACTTGCTCGAATCGGTCTTCTCTGCAACTGTGTTCTTCCCCCGGGACTAAATGACACAAAAGTTCGGCATGCTACATTAGACAAGGTTCAGGAAGGAGAGAAGAGGAAAACAAGAAACTGGTCGAACAAGTACAGACCTTCGTCCGATCCTCCAATGTCGTCTTGCCCACAAGGTTCTTCAATTAAAAGTAGTAGCCAAAGACATTGCATTTCTGCATCTTCATCTTTGATTAATGCTTCTTCAACCTCGACCTTAACAGTTACGTAA 684 0.3991 MLCNKLVMVPRKKNRGTVPVYLNVYDLTTINGYAYWFGLGVYHSGVQVHGIEYGFGAHEHDTTGIFEVQPKNCPGFTFRKSIFIGTTDLGQKEVQEFMEKLAQNYSGKTYQIILKNCNHFCNDVCLKLTGKSIPRWVNRLARIGLLCNCVLPPGLNDTKVRHATLDKVQEGEKRKTRNWSNKYRPSSDPPMSSCPQGSSIKSSSQRHCISASSSLINASSTSTLTVT* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0824 227 Gene3D PPPDE domains 13 172 IPR042266 -
Lan14g0824 227 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 5 225 - -
Lan14g0824 227 MobiDBLite consensus disorder prediction 182 202 - -
Lan14g0824 227 PANTHER DESUMOYLATING ISOPEPTIDASE 5 225 IPR008580 GO:0008233
Lan14g0824 227 MobiDBLite consensus disorder prediction 169 202 - -
Lan14g0824 227 ProSiteProfiles PPPDE domain profile. 18 155 IPR008580 GO:0008233
Lan14g0824 227 SMART DUF862_2a 18 156 IPR008580 GO:0008233
Lan14g0824 227 Pfam PPPDE putative peptidase domain 19 151 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0824 Lan-Chr14 15036948 15038654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0824 K22763 - gmx:100306675 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1053 15 19563264 19564653 Lan14g0824 14 15036948 15038654 LSH
Lan14g0824 14 15036948 15038654 Lan3g1101 3 23357453 23359566 LSH
Lan3g1719 3 29716359 29718520 Lan14g0824 14 15036948 15038654 PCT
Lan14g0824 14 15036948 15038654 Lan3g1719 3 29716359 29718520 PCT