Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1708 ATGGGTAGGAAACGGATTCATGTATTTGATGCCAAAAAAGATGTTTTTTTCTCAGTTTATGATCTGGGTCTTAACAAAGAAGGGCAATATTATTATCACCCTGAAGCCTTATTTGCAAGTGTTGGCCAAATGGGAATGAGTTTTGGTGTTCAAGAAGAAAGGGCTATGAATAAGAGCAAGAAAAAGCTGAAGATCAAGGTGAAGAACCCTTCACTTAGGAGGTTGATAAGTGGTGCATTTGCAGGGGCAGTTTCAAGGACTGTGGTGGCACCATTGGAGACTATAAGGACCCATTTGATGGTTGGAACTAGTGGCCATTCTACCACTGAGGTTTTCCATGATATTATGAAGAATGATGGCTGGAAGGGATTGTTTAGGGGTAATTTCGTCAATGTTATTCGGGTTGCTCCTAGTAAGGCCATTGAGCTTTTTGCTTTTGATACAGTTAACAAAAGCTTATCACCAAAGCCCGGGGAACAACCCAAACTCCATATTCCTCCGTCATTGATAGCCGGTGCCTGTGCTGGAGTTAGTTCAACTATATGCACGTATCCTCTCGAGTTACTCAAAACTCGACTAACTGTCCAGAGAGGTGTCTATAATGGTCTACTTGATGCATTCTTGAAAATAGTTAAAGAAGAGGGTCCTTCAGAACTTTATAGAGGCCTTGCTCCTAGTCTTATTGGGGTTATTCCTTATTCAGCCACCAATTACTTTGCCTATGACACTTTAAGGAAAGCATACAGAAAATTTAGTAAAAAAGAGAAGATTGGAAACATTGAAACACTTCTGATAGGATCAGCAGCTGGTGCTATTTCAAGTACTGCTACTTTTCCGCTCGAAGTGGCGCGTAAGCATATGCAAGTTGGAGCCCTAAGTGGAAGGCAAGTTTACAAAAATGTGATTCATGCCCTTGCCACCATACTCGAACAAGAAGGGTTACAAGGTTTGTATAGAGGGTTAGGACCAAGTTGCATGAAGTTAGTGCCTGCTGCAGGAATCTCATTTATGTGTTATGAAGCTTGCAAGAGGATTCTGGTTCAGAATGATGACGAGGAATAG 1062 0.4153 MGRKRIHVFDAKKDVFFSVYDLGLNKEGQYYYHPEALFASVGQMGMSFGVQEERAMNKSKKKLKIKVKNPSLRRLISGAFAGAVSRTVVAPLETIRTHLMVGTSGHSTTEVFHDIMKNDGWKGLFRGNFVNVIRVAPSKAIELFAFDTVNKSLSPKPGEQPKLHIPPSLIAGACAGVSSTICTYPLELLKTRLTVQRGVYNGLLDAFLKIVKEEGPSELYRGLAPSLIGVIPYSATNYFAYDTLRKAYRKFSKKEKIGNIETLLIGSAAGAISSTATFPLEVARKHMQVGALSGRQVYKNVIHALATILEQEGLQGLYRGLGPSCMKLVPAAGISFMCYEACKRILVQNDDEE* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1708 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 152 IPR018108 -
Lan3g1708 353 PRINTS Mitochondrial carrier protein signature 74 87 IPR002067 GO:0055085
Lan3g1708 353 PRINTS Mitochondrial carrier protein signature 87 101 IPR002067 GO:0055085
Lan3g1708 353 PRINTS Mitochondrial carrier protein signature 127 147 IPR002067 GO:0055085
Lan3g1708 353 PRINTS Mitochondrial carrier protein signature 178 196 IPR002067 GO:0055085
Lan3g1708 353 PRINTS Mitochondrial carrier protein signature 220 238 IPR002067 GO:0055085
Lan3g1708 353 PRINTS Mitochondrial carrier protein signature 266 288 IPR002067 GO:0055085
Lan3g1708 353 PANTHER ADENINE NUCLEOTIDE TRANSPORTER BT1, CHLOROPLASTIC/MITOCHONDRIAL 49 352 - -
Lan3g1708 353 Gene3D Mitochondrial carrier domain 65 351 IPR023395 -
Lan3g1708 353 PANTHER SOLUTE CARRIER FAMILY 25 49 352 - -
Lan3g1708 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 163 247 IPR018108 -
Lan3g1708 353 SUPERFAMILY Mitochondrial carrier 70 341 IPR023395 -
Lan3g1708 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 257 345 IPR018108 -
Lan3g1708 353 Pfam Mitochondrial carrier protein 163 250 IPR018108 -
Lan3g1708 353 Pfam Mitochondrial carrier protein 257 349 IPR018108 -
Lan3g1708 353 Pfam Mitochondrial carrier protein 70 153 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1708 Lan-Chr3 29635022 29637867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1708 1 352 Organic Solute Cotransporters AT4G32400 64.706 1.79e-180 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1708 K14684 - mnt:21385479 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1708 3 29635022 29637867 Lan15g1026 15 19368010 19371727 PCT
Lan3g1708 3 29635022 29637867 Lan3g1067 3 22960339 22965130 PCT
Lan15g1026 15 19368010 19371727 Lan3g1708 3 29635022 29637867 PCT
Lan3g1067 3 22960339 22965130 Lan3g1708 3 29635022 29637867 PCT