Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1067 ATGGGTAGGAAGGGAATTCAAGTATTCGATGACAAAAGAGATGGGTTTTTCTCTGTCTGCAATTTGGGGTGTGAAAACAATTTTCACCCTGGAGGTTTATTTGCCAGCGTTGGCCAAATGGGAATGGGGTTTGGTAGTAATGTTCAACCCAATAACCCTTCTGATTCACGTGACAACAATGGTAATGGTAATGGTAATGATGGTGGCTTGAATCTGAAACTTTGCTTCAATGAATTGTACTTCAGGTATGTGAAATCTCAGGGGAAAGTTCAGGTTGTTGGGGTTCCACTGGAGGAAGATGAGGAAGGGTTTAAGAGTAAGAAGCAAAAGGGTTGTGGTGGTGGTCTTAAGCTTAAGATTAAGGTCAAGAACCCTTCACTTAGGAGGTTGTTTAGTGGTGCTATTGCTGGGGCTTTGTCTCGAACCGCTGTGGCGCCACTGGAGACAATAAGGACTCATTTGATGGTTGGAAGTAGTGGCCATTCTACCACTGAGGTGTTCAATAATATCATTAATACTGATGGATGGAAGGGTTTGTTTAGGGGTAATTTCGTTAATGTCATTCGGGTTGCTCCTAGCAAAGCTATTGAGCTATTTGCGTACGATACGGTTAACAAGAACCTTTCAGCAAAGCCAGGGGAGCAGCCCAAACTCCCAATTCCTGCTTCATTGATTGCAGGTGCCTGTGCGGGAGTGAGTTCAACTATTTGCACATACCCCCTTGAATTACTTAAGACTCGCCTAACTATCGAGAGAGGTGTTTACGATGGTCTACTCGATGCATTCGTGAAAATTATTCGAGAAGAGGGTCCTGCAGAACTTTACAGAGGTCTCACTCCCAGTCTAATTGGAGTCATTCCATATGCTGCCACAAATTACTTCGCTTACGACACTTTACGAAAAGCATACCGGAAAGTTTTTAAGCAAGAGAAGATTGGCAACATTGAAACGCTTTTGATTGGATCAGCAGCTGGTGCTATTTCAAGCACTGCAACTTTTCCTCTTGAGGTAGCTCGCAAGCACATGCAAGTTGGAGCTCTCAGTGGAAGGCAGGTTTACAAGAATGTGATTCATGCACTCTCAAGTATACTAGAACAAGAAGGGGTGCAGGGTTTATATAGAGGTCTGGGACCTAGTTGCATGAAGTTGGTGCCGGCCGCTGGAATTTCTTTCATGTGCTATGAAGCATGCAAGAAGATCCTTATAGATGACGAGGACGAGGAATAG 1227 0.4409 MGRKGIQVFDDKRDGFFSVCNLGCENNFHPGGLFASVGQMGMGFGSNVQPNNPSDSRDNNGNGNGNDGGLNLKLCFNELYFRYVKSQGKVQVVGVPLEEDEEGFKSKKQKGCGGGLKLKIKVKNPSLRRLFSGAIAGALSRTAVAPLETIRTHLMVGSSGHSTTEVFNNIINTDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSAKPGEQPKLPIPASLIAGACAGVSSTICTYPLELLKTRLTIERGVYDGLLDAFVKIIREEGPAELYRGLTPSLIGVIPYAATNYFAYDTLRKAYRKVFKQEKIGNIETLLIGSAAGAISSTATFPLEVARKHMQVGALSGRQVYKNVIHALSSILEQEGVQGLYRGLGPSCMKLVPAAGISFMCYEACKKILIDDEDEE* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1067 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 312 400 IPR018108 -
Lan3g1067 408 Gene3D Mitochondrial carrier domain 121 405 IPR023395 -
Lan3g1067 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 207 IPR018108 -
Lan3g1067 408 MobiDBLite consensus disorder prediction 45 64 - -
Lan3g1067 408 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 23 407 - -
Lan3g1067 408 PANTHER SOLUTE CARRIER FAMILY 25 23 407 - -
Lan3g1067 408 PRINTS Mitochondrial carrier protein signature 129 142 IPR002067 GO:0055085
Lan3g1067 408 PRINTS Mitochondrial carrier protein signature 142 156 IPR002067 GO:0055085
Lan3g1067 408 PRINTS Mitochondrial carrier protein signature 182 202 IPR002067 GO:0055085
Lan3g1067 408 PRINTS Mitochondrial carrier protein signature 233 251 IPR002067 GO:0055085
Lan3g1067 408 PRINTS Mitochondrial carrier protein signature 275 293 IPR002067 GO:0055085
Lan3g1067 408 PRINTS Mitochondrial carrier protein signature 321 343 IPR002067 GO:0055085
Lan3g1067 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 302 IPR018108 -
Lan3g1067 408 Pfam Mitochondrial carrier protein 125 209 IPR018108 -
Lan3g1067 408 Pfam Mitochondrial carrier protein 312 403 IPR018108 -
Lan3g1067 408 Pfam Mitochondrial carrier protein 218 305 IPR018108 -
Lan3g1067 408 SUPERFAMILY Mitochondrial carrier 125 396 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1067 Lan-Chr3 22960339 22965130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1067 311 408 Organic Solute Cotransporters AT4G32400 35.000 4.72e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1067 K14684 - qsu:111999876 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1067 3 22960339 22965130 Lan3g1067 3 22960339 22965130 ECH
Lan15g1026 15 19368010 19371727 Lan3g1067 3 22960339 22965130 LSH
Lan3g1708 3 29635022 29637867 Lan3g1067 3 22960339 22965130 PCT
Lan3g1067 3 22960339 22965130 Lan3g1708 3 29635022 29637867 PCT