Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1026 ATGGGTAGGAAGGGAATTCAAGTATTCGATGATAAAAGAGATGGGTTTTTCTCTGTCTCCAATTTGGGTTCACAACAATGGAGTGAAAACAATGAAGGACAATATTTTCACCCAGGAGGCTTGTTTGCCAGCGTTGGCCAAATGGGAATGGGATTTGGTAGTAATGTTCAACCCAACAACAATGATTCACGCAACAACGATGGTAATGGTAATGACGGTGGTTTGAATCTGAAACTTTGCTTCAATGAGTTGTACTTCAAGTATGTGAAATCTCAGGGGAAAGTTCAGATTGTTGGGGTTCCATTGGAAGAAGAAGAGGAAAGGGTTAATAGTAAGAAGAATGGTGATGGTCTTAAGCTGAAGATTAAGGTAAAGAACCCTTCACTTAGGAGGTTATTTAGTGGGGCTATTGCTGGGGCTGTGTCGCGAACCGCGGTGGCGCCATTGGAGACTATAAGGACTCATTTGATGGTTGGAAGTAGTGGCAATTCTACCACCGAGGTGTTCAATAATATTATCAACACTGATGGATGGAAGGGTTTGTTTAGGGGTAATTTCGTTAATGTCATTCGGGTTGCTCCTAGCAAAGCCATTGAGCTATTTGCTTATGATACAGTTAACAAGAACCTTTCACCAAAGCCTGGGGAACAGCCCAAACTACCTATTCCTGCATCATTGATTGCAGGTGCTTGTGCTGGAGTGAGTTCGACTATATGCACATATCCTCTTGAGTTACTCAAGACAAGACTAACTATCCAGAGAGGTGTTTATGATGGTCTGCTCGATGCGCTCGTGAAAATTATTCGTGAAGAGGGTCCTGCAGAGCTTTACAGAGGCCTCGCTCCCAGTCTTATCGGAGTCATTCCATATTCTGCCACAAATTACTTCGCATATGACACTTTACGGAAAGCATACCGGAAAGTATTTAAACAAGAGAAGATAGGCAACATTGAAACCCTTTTGATTGGATCAGCAGCTGGTGCTATTTCAAGCACAGCGACTTTTCCTCTTGAGGTAGCTCGCAAACACATGCAAGTAGGAGCTCTCAGTGGAAGGCAAGTTTACAAAAATGTGATTCATGCACTTTCAAGCATCCTAGAACAAGAAGGGATTCAGGGTTTATATAGAGGGCTAGGACCTAGTTGCATGAAGTTAGTTCCAGCCGCCGGAATCTCTTTCATGTGTTATGAAGCATGCAAGAGGATACTTATAGATGATGGCTATGAGGATTAA 1233 0.4282 MGRKGIQVFDDKRDGFFSVSNLGSQQWSENNEGQYFHPGGLFASVGQMGMGFGSNVQPNNNDSRNNDGNGNDGGLNLKLCFNELYFKYVKSQGKVQIVGVPLEEEEERVNSKKNGDGLKLKIKVKNPSLRRLFSGAIAGAVSRTAVAPLETIRTHLMVGSSGNSTTEVFNNIINTDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQPKLPIPASLIAGACAGVSSTICTYPLELLKTRLTIQRGVYDGLLDALVKIIREEGPAELYRGLAPSLIGVIPYSATNYFAYDTLRKAYRKVFKQEKIGNIETLLIGSAAGAISSTATFPLEVARKHMQVGALSGRQVYKNVIHALSSILEQEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKRILIDDGYED* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1026 410 PRINTS Mitochondrial carrier protein signature 131 144 IPR002067 GO:0055085
Lan15g1026 410 PRINTS Mitochondrial carrier protein signature 144 158 IPR002067 GO:0055085
Lan15g1026 410 PRINTS Mitochondrial carrier protein signature 184 204 IPR002067 GO:0055085
Lan15g1026 410 PRINTS Mitochondrial carrier protein signature 235 253 IPR002067 GO:0055085
Lan15g1026 410 PRINTS Mitochondrial carrier protein signature 277 295 IPR002067 GO:0055085
Lan15g1026 410 PRINTS Mitochondrial carrier protein signature 323 345 IPR002067 GO:0055085
Lan15g1026 410 PANTHER SOLUTE CARRIER FAMILY 25 29 406 - -
Lan15g1026 410 SUPERFAMILY Mitochondrial carrier 127 398 IPR023395 -
Lan15g1026 410 Pfam Mitochondrial carrier protein 220 307 IPR018108 -
Lan15g1026 410 Pfam Mitochondrial carrier protein 314 405 IPR018108 -
Lan15g1026 410 Pfam Mitochondrial carrier protein 127 210 IPR018108 -
Lan15g1026 410 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 29 406 - -
Lan15g1026 410 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 304 IPR018108 -
Lan15g1026 410 Gene3D Mitochondrial carrier domain 123 408 IPR023395 -
Lan15g1026 410 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 209 IPR018108 -
Lan15g1026 410 ProSiteProfiles Solute carrier (Solcar) repeat profile. 314 402 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1026 Lan-Chr15 19368010 19371727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1026 1 409 Organic Solute Cotransporters AT4G32400 65.526 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1026 K14684 - qsu:111999876 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1026 15 19368010 19371727 Lan3g1067 3 22960339 22965130 LSH
Lan3g1708 3 29635022 29637867 Lan15g1026 15 19368010 19371727 PCT
Lan15g1026 15 19368010 19371727 Lan3g1708 3 29635022 29637867 PCT