Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1668 ATGGGTTTTTCTGCTTTGACCCTTTCTTTCTTACTCTTAGCATTTGTGCCTCATCAACTACATGCTTCAAACCATGGCTTATTTGGTACAAAATATGTTACTACTAATGTGGATGGAATATGCACCTCTTCTGTTATTGTTCATGGATACAAGTGCCAAGAACTTGAAGTTACAACTAAAGATGGCTACATTCTTAGTTTACAAAGGATCCCAGAAGGTCGAGGTGAAGTTAGTGGCACTTGGACTAAGAAGCAACCAGTAATTATACAACATGGAGTACTAGTGGATGGTATGACATGGCTATTGAACCCTCCAGAGCAAGACCTACCATTGATTTTGGCTGATAATGGATTTGATGTGTGGATTGCTAACACAAGAGGAACAAGATATAGCCGCAGACATATCTCATTGGACCCCTCTAACCCGGCCTTTTGGAATTGGTCATGGGATGAACTAGTTGCTTATGATCTTCCTGCAGTATTTGATTATGTGTTCAAGGAAACAGGCCAAAAGATTAATTATGTGGGCCATTCTCTGGGAACTTTGATAGCTTTGGCTTCATTCTCTGAAGGGAAATTAGTGAACCAAGTGAAATCAGCAGCATTGTTGAGCCCAATTGCTTATTTGAGTCACATGAACACAGCACTTGGAGTTGTTGCAGCCAAAACCTTTGTTGGTGAGTTCACTACTCTATTTGGTTTGGCAGAGTTTAATCCCAGAGGGATACCTGTTAATGCATTTCTTCATTCTCTCTGTGCTTACCCTGGAATAGATTGCTATGACTTGTTGACTGCACTAACTGGTAAAAATTGTTGTCTCAATTCTTCAACTGTTGACCTGTTCTTAAGGAATGAACCTCAATCAACATCAACAAAAAACTTAGTACACTTGTCTCAAACTGTTAGAGATGGGTTTCTATCAAAATTCAATTATGTGACACCAACATATAATTATATGCATTATGGAGAATTATTTCCACCAATCTATAACCTTTCTAATATTCCTCATGATATCCCTATATTCATTAGCTATGGTGGCAAAGATGCACTTTCTGATGTTCATGATGTTGTGAACTTACTTGATTCCCTTAAATTCCATGATGTGGATAAGCTAAGTGTTCAGTTCATTAAGGACTATGCTCATGCTGATTATATCATGGGGATCAATGCTAGGGACATTGTATATAATGTTGTTCTTGCATTTTTCAACCGCCCATTTAACATTTAA 1227 0.3806 MGFSALTLSFLLLAFVPHQLHASNHGLFGTKYVTTNVDGICTSSVIVHGYKCQELEVTTKDGYILSLQRIPEGRGEVSGTWTKKQPVIIQHGVLVDGMTWLLNPPEQDLPLILADNGFDVWIANTRGTRYSRRHISLDPSNPAFWNWSWDELVAYDLPAVFDYVFKETGQKINYVGHSLGTLIALASFSEGKLVNQVKSAALLSPIAYLSHMNTALGVVAAKTFVGEFTTLFGLAEFNPRGIPVNAFLHSLCAYPGIDCYDLLTALTGKNCCLNSSTVDLFLRNEPQSTSTKNLVHLSQTVRDGFLSKFNYVTPTYNYMHYGELFPPIYNLSNIPHDIPIFISYGGKDALSDVHDVVNLLDSLKFHDVDKLSVQFIKDYAHADYIMGINARDIVYNVVLAFFNRPFNI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1668 408 Gene3D alpha/beta hydrolase 31 404 IPR029058 -
Lan3g1668 408 PANTHER LYSOSOMAL ACID LIPASE-RELATED 7 404 - -
Lan3g1668 408 PIRSF Steryl_ester_lip 4 406 IPR025483 GO:0016788
Lan3g1668 408 SUPERFAMILY alpha/beta-Hydrolases 48 403 IPR029058 -
Lan3g1668 408 Pfam Partial alpha/beta-hydrolase lipase region 47 103 IPR006693 GO:0006629
Lan3g1668 408 PANTHER TRIACYLGLYCEROL LIPASE 2 7 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1668 Lan-Chr3 29044469 29051028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1668 3 403 Acyl Lipid Metabolism Gene Families AT2G15230 37.065 9.38e-88 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1668 K01052 - gmx:100779460 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g1078 10 15995867 16000160 Lan3g1668 3 29044469 29051028 LSH
Lan3g1668 3 29044469 29051028 Lan20g1418 20 20856010 20859895 PCT