Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1418 ATGGGTCTCTTAGGTTTGTGGGGTTTTGTTGCATTTATGCTATGTTTCTTAGTCTTAGCACATGTTCCTCATCAATCACATGCTTCAAGTCGTAGCTCCATTAGTAGAAAAAACCTTGTTGTTGACCCTTTATCGGAAGGTTTATGTGCCTCTATGGTCATTGGTCATGGCTACAAATGTCACGAGCTTGAAGTTACAACCAAAGATGGGTTCATTCTTAGCCTCCAAAGGATTCCAGAAGGTAGGTGTGAGAATGGAGGCATTGGTACTAAGAAACAGCCGATAATAATACAACATGGAGTAATGGTGGATGGAATGATATGGTTTATGAACTCTCCAGAACAAAACCTACCCATGATTCTAGCAGATAGTGGGTTTGATGTGTGGATTGTTAATTCTAGAGGAACCAGATATAGCCGCAGACACACTTCTCTACATCCCTCTAATGATGAGTTTTGGAATTGGTGTTTGGATGATCTTGTTACATATGATCTTCCTGCTGTTTTTGATTTTGTGTTCAACCAAACAGGCCACAAGATCCATTACGTGGGTCATTCTTTGGGAACTTTGATGGCTTTGACATCATTTTCAGAGAGGCAGTTGGTGCATCAGGTGAAATCTGCTGCCTTGTTGAGCCCAGTTGCATTTTTGAGTCACATGAAAACAGCACTTGGAGTTATTGCTGCAAGATCCTTGCTTAGTGAGGCTTTGACCATACTCAGAGTAGGAGAATTTAATCCTAAAGGGTTACTTGTGAAAGGGTATGTAAGGACATTTTGTGCTTCCCCTGGGGTAGACTGTAGAGACCTGTTGAGTGCAATCACTGGTCCAAATTGCTGCCTCAATTCTTCAGCAGTTGATCAATTATTGTCACATGAAAATCTTCAGCCAACATCAACAAAGAACATGGTGCACTTAGCTCAAATTGTTAGATATGGGGTTTTGGCAAAATACAACCATATGGAACCACAAAATATGATGAAGAATCCTCAAAATATATTCCCTCAAACCTACTACAACCTTTCTAATATCCCTCATGACCTCCCTCTCTTCCTTAGCTACGGTGGCAAAGACGCCCTCTCCGATGTCGCCGATGTTCATAATTTGATCGATCGATTAAAATCCCATGACGTAGATAAGCTAAATGTTCAATACATCAAGGATTATGCTCATGCTGATCACATTATGGCTCTCAATGCCAAGGATATAGTATACAATGCTATTGTAAAATTTTTCAAGAATCAATAA 1248 0.4022 MGLLGLWGFVAFMLCFLVLAHVPHQSHASSRSSISRKNLVVDPLSEGLCASMVIGHGYKCHELEVTTKDGFILSLQRIPEGRCENGGIGTKKQPIIIQHGVMVDGMIWFMNSPEQNLPMILADSGFDVWIVNSRGTRYSRRHTSLHPSNDEFWNWCLDDLVTYDLPAVFDFVFNQTGHKIHYVGHSLGTLMALTSFSERQLVHQVKSAALLSPVAFLSHMKTALGVIAARSLLSEALTILRVGEFNPKGLLVKGYVRTFCASPGVDCRDLLSAITGPNCCLNSSAVDQLLSHENLQPTSTKNMVHLAQIVRYGVLAKYNHMEPQNMMKNPQNIFPQTYYNLSNIPHDLPLFLSYGGKDALSDVADVHNLIDRLKSHDVDKLNVQYIKDYAHADHIMALNAKDIVYNAIVKFFKNQ* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1418 415 PIRSF Steryl_ester_lip 7 415 IPR025483 GO:0016788
Lan20g1418 415 PANTHER LYSOSOMAL ACID LIPASE-RELATED 12 415 - -
Lan20g1418 415 Pfam Partial alpha/beta-hydrolase lipase region 51 111 IPR006693 GO:0006629
Lan20g1418 415 Gene3D alpha/beta hydrolase 40 414 IPR029058 -
Lan20g1418 415 PANTHER TRIACYLGLYCEROL LIPASE 2 12 415 - -
Lan20g1418 415 SUPERFAMILY alpha/beta-Hydrolases 56 413 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1418 Lan-Chr20 20856010 20859895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1418 32 415 Acyl Lipid Metabolism Gene Families AT2G15230 34.884 1.17e-84 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1418 K01052 - gmx:100790742 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g1078 10 15995867 16000160 Lan20g1418 20 20856010 20859895 PCT
Lan3g1668 3 29044469 29051028 Lan20g1418 20 20856010 20859895 PCT