Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1078 ATGGCTTTCCTTAGCTTGATGATTAGTTTTGCTCCTTTGACCCTTTATTTCTTACTCTTACCATTTGTACCTCATCAAGTACATGCTTCAAGCCATGCCTCATTTGTTACAAAATATGTTACTAATGATTACTCTAATGTCGGTGGTTTATGCGTCTCTTCGATTATTGTTCATGGATACAAGTGCCAAGAACATATGGTTACAACCGAAGATGGCTACATTCTTGGGTTGCAAAGGATCCAAGAAGGTCGAGCCGAAGTTAATGGCATTCGAGCTAAGAAGCAACCAGTGATCCTACAACATGGAGTGTTAGTGGATAGTAATTCATGGTTTGTGAATGCTCCAAAGCAGAATCTACCCTTCATTTTGGCTGATAATGGCTATGATGTGTGGATTTCTAACACAAGAGGAACAACATTTACTCGCCGACATGTCTCATTGGACCCATCCAATCGTGAATTTTGGAATTGGACTTGGGATGAATTGGTTGCCCATGATCTCCCAGCATTGTTTGACTATGTCTCCAAGGAAACTAGGCAAAAAATTAACTACATTGGTCATTCTCACGGAACTTTAATAGCTTTGACTTCCTTTTCTGAAGGGAAATTAGTTAACCAAGTTAAATCAGCAGTTTTGCTTAGTCCTGTTGCTTATTTAAGCCACATGACCACAGAACTTGGAGTTGTTGCAGCCAGATACTTTCTTGACGAGGTCATTCACCTAATTGGTCTCGCAGAATTTGATCTTCGCTTGCCACAAGTTAAAGCTATTATTCGGTCTCTATGTGATAGTAATCCTGGGATAAACTGTTATGACTTGTTGAATGCAATAACTGGTCCAAATTGTTGTCTCAATTCAACTACTGTTACTAGGTTCTTCAAGAATGAACCACAGTCAACATCAACAAAAAACTTAGTGCACTTTGCTCAAACTTTTAGAAATGGGGTTCTAACAAAATTCGACTATGTATTACCAAGTGAAAATTATAGGCATTATGGACAATTATTCCCTCCAAGGTATACCCTTTCCAATATCCCTCATAACATTCCTCTCTTCCTTAGCTATGGTGGCAAAGATGCACTATCAGATGTTACCGATGTTCAGAAATTACTCGATATCCTTAAGTTCCATGATGCTGATAAGCTAAGTGTTCAGTTCATTAAGGAATATGCTCATGCTGATTTTATCATGGCCATCAATGCCAAGGACATTGTTTATAAACATGTTCTTTCATTTTTCAGCCGTCACGCTTAG 1254 0.386 MAFLSLMISFAPLTLYFLLLPFVPHQVHASSHASFVTKYVTNDYSNVGGLCVSSIIVHGYKCQEHMVTTEDGYILGLQRIQEGRAEVNGIRAKKQPVILQHGVLVDSNSWFVNAPKQNLPFILADNGYDVWISNTRGTTFTRRHVSLDPSNREFWNWTWDELVAHDLPALFDYVSKETRQKINYIGHSHGTLIALTSFSEGKLVNQVKSAVLLSPVAYLSHMTTELGVVAARYFLDEVIHLIGLAEFDLRLPQVKAIIRSLCDSNPGINCYDLLNAITGPNCCLNSTTVTRFFKNEPQSTSTKNLVHFAQTFRNGVLTKFDYVLPSENYRHYGQLFPPRYTLSNIPHNIPLFLSYGGKDALSDVTDVQKLLDILKFHDADKLSVQFIKEYAHADFIMAINAKDIVYKHVLSFFSRHA* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1078 417 PIRSF Steryl_ester_lip 11 417 IPR025483 GO:0016788
Lan10g1078 417 Pfam Partial alpha/beta-hydrolase lipase region 55 113 IPR006693 GO:0006629
Lan10g1078 417 SUPERFAMILY alpha/beta-Hydrolases 58 413 IPR029058 -
Lan10g1078 417 PANTHER LYSOSOMAL ACID LIPASE-RELATED 14 416 - -
Lan10g1078 417 PANTHER TRIACYLGLYCEROL LIPASE 2 14 416 - -
Lan10g1078 417 Gene3D alpha/beta hydrolase 45 414 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1078 Lan-Chr10 15995867 16000160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1078 45 413 Acyl Lipid Metabolism Gene Families AT2G15230 37.127 1.17e-95 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1078 K01052 - gmx:100779460 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g1078 10 15995867 16000160 Lan3g1668 3 29044469 29051028 LSH
Lan10g1078 10 15995867 16000160 Lan20g1418 20 20856010 20859895 PCT