Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1615 ATGGTTGGCAAGGAGAACTTGAAGACCAAGGACTTGAACTTATGGTTTGAAAACCTTATAATGGTGGCTGGTGGGAACATCAAAGCTGGGGTGATCACTGAATGGAAAGACATTCCTGTTGAGCTCTTGGTTAAAATTTTGTCTCTTGTTGATGATCAGACTGTGATCACTGCTTCTGGAGTTTGTCGTGGTTGGAGAGATGCAATTTACTTCGGTGTTGCCCATTTATCACTCTCATGGTGTAGCAAGAACATGAATAATCTGGTTCTATGCCTTGTTCCTAAGTTCGCAAAATTGCAAACTCTGATCCTACGTCAAGACAAGCCTCAACTAGAGGACAATGCTGTTGAGACTATTGCAAATTGCTGTCATGAGCTACAGATCCTTGACCTCAGCAAAAGTTTCAAGCTTACTGATCGGTCACTGTATGCTATAGCCCATGGTTGTTGTGATCTTACAAAACTAAACATCAGTGGCTGTTCATCATTTAATGACAATGCTTTGGCTTACCTTGCCAGCTTCTGCAGAAAACTGAAAGTTCTGAATCTTTGTGGATGTGTTAGAGCAGCATCTGATACTGCATTACAGGCTATTGGACGTTACTGCAATCAGTTACAGTCTTTGAATCTTGGCTGGTGTGAAAATGTTGGTGATGTTGGAGTTATGAGTTTAGCTTATGGGTGTCCTGATCTTAGGACAGTTGACTTGTGTGGCTGTGTCCGTATAACAGATGATAGTGTGGTTGCTTTGGCAAACAGGTGCCATCTAAGTTCTCTTGGACTGTACTACTGCAAAAACATCACAGACAGAGCAATGTACTCTTTGGCACAAAGCAAAGTGAACAACAAGATGGTGAGAACTGTGAAAGGAACAAGTAACGATGATGGCCTAAGGACCTTAAACATTAGCCAATGCACTGCACTCACCCCGTCTGCTGTTCAAGCTGTTTGTGACTCATTCCCTTCTCTTCACACATGCTCTGGGAGACACTCTCTCATCATGAGTGGCTGTCTCAATTTGACTTCGGTTCATTGCGCCTGTGCTGTCCATGCGCACCACCGCTCGTTCACCACTTTCCCTTATCCTGCACATTGA 1095 0.4356 MVGKENLKTKDLNLWFENLIMVAGGNIKAGVITEWKDIPVELLVKILSLVDDQTVITASGVCRGWRDAIYFGVAHLSLSWCSKNMNNLVLCLVPKFAKLQTLILRQDKPQLEDNAVETIANCCHELQILDLSKSFKLTDRSLYAIAHGCCDLTKLNISGCSSFNDNALAYLASFCRKLKVLNLCGCVRAASDTALQAIGRYCNQLQSLNLGWCENVGDVGVMSLAYGCPDLRTVDLCGCVRITDDSVVALANRCHLSSLGLYYCKNITDRAMYSLAQSKVNNKMVRTVKGTSNDDGLRTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVHAHHRSFTTFPYPAH* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1615 364 PANTHER F-BOX SKP2A-LIKE PROTEIN 1 345 - -
Lan3g1615 364 Gene3D Ribonuclease Inhibitor 72 296 IPR032675 -
Lan3g1615 364 PANTHER UNCHARACTERIZED 1 345 - -
Lan3g1615 364 SUPERFAMILY RNI-like 74 343 - -
Lan3g1615 364 Gene3D - 32 71 - -
Lan3g1615 364 SMART LRR_CC_2 254 278 IPR006553 -
Lan3g1615 364 SMART LRR_CC_2 123 148 IPR006553 -
Lan3g1615 364 SMART LRR_CC_2 96 122 IPR006553 -
Lan3g1615 364 SMART LRR_CC_2 149 174 IPR006553 -
Lan3g1615 364 SMART LRR_CC_2 228 253 IPR006553 -
Lan3g1615 364 SMART LRR_CC_2 202 227 IPR006553 -
Lan3g1615 364 SMART LRR_CC_2 297 319 IPR006553 -
Lan3g1615 364 SMART LRR_CC_2 175 201 IPR006553 -
Lan3g1615 364 Pfam F-box-like 36 69 IPR001810 GO:0005515
Lan3g1615 364 Pfam Leucine Rich repeat 202 225 IPR001611 GO:0005515
Lan3g1615 364 SUPERFAMILY F-box domain 35 71 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1615 Lan-Chr3 27963469 27967135 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1615 K03875 - gmx:100797840 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0741 15 16384294 16396153 Lan3g1615 3 27963469 27967135 LSH
Lan14g0578 14 12134274 12138209 Lan3g1615 3 27963469 27967135 LSH