Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0578 ATGGTTGGTAAGGAGAATCTGAAGACTGAGGACTTGAATTTGTGCTTTGAGAAGCTTATGATGGTGGCTGGTGGTAACAGTGGGATAGGAGGGAACTTGAAAGCTGGGGTAATCACTGAATGGAAGGATATTCCTGTTGAGCTCTTGGTGCAAATTTTGTCTCTTGTTGATGATCAAACTGTGATCATAGCTTCTGGAGTTTGTCGTGGTTGGAGAGATGCGATTTACTTCGGGGTAGCGCGTTTATCACTCTCATGGTGTAATAAGAACCTGAACAACTTGGTCCTGTCTATTGTTCCTAAGTTCGCAAAATTGCATACTCTGATCCTACGTCAAGACAAGCCTCAACTAGAGGATAATGCTGTTGAGACTATTGCAAATTGCTGTCGTGAGCTGCAGATCCTTGACCTCAGCAAAAGTTTCAAGCTTACTGATCGGTCACTGTATGCCGTAGCTCATGGTTGTTGTGAACTTACGAAACTAAACATCAGTGGGTGTTCTGCATTCAGTGACAATGCTCTTGCTTACCTTGCCAGTTTCTGCAAAAAACTGAAAGTTCTAAATCTTTGTGGATGTGTTAGAGCAGCATCGGATACTGCATTACAGGCTATTGGTCGTTACTGCAATCAGTTACAGTCTTTGAATCTTGGATGGTGTGAAAATGTTGGTGATGTCGGAGTCATGAGTTTAGCATATGGGTGCCCTGATCTTAGAACAGTTGACTTATGTGGCTGTGTCCAAATTACAGATGATAGTGTGATTGCTTTGGCAAACAAATGTCCCCATTTGAGATCCCTTGGACTTTACTACTGCAAAAACATCACAGACAGAGCAATGTATTCTTTGGCACAAAGCAAAGTGAACAACAGAATGTGGAGAACTGTGAAAGGAGGAAGAGAAAGTGATGAAGATGGCCTAAGAACATTGAACATTAGCCAATGCACTGCACTCACCCCTTCTGCTGTTCAAGCTGTTTGTGACTCATTCCCTTCACTTCACACATGCTCAGGTAGACACTCACTCATCATGAGTGGCTGCCTCAATCTGACTTCTGTTCATTGTGCCTGTGCTGTCCATGCGCACCACCGCGCGTTCAGCACGTTCCTCCATCTGGCTCATTGA 1122 0.4394 MVGKENLKTEDLNLCFEKLMMVAGGNSGIGGNLKAGVITEWKDIPVELLVQILSLVDDQTVIIASGVCRGWRDAIYFGVARLSLSWCNKNLNNLVLSIVPKFAKLHTLILRQDKPQLEDNAVETIANCCRELQILDLSKSFKLTDRSLYAVAHGCCELTKLNISGCSAFSDNALAYLASFCKKLKVLNLCGCVRAASDTALQAIGRYCNQLQSLNLGWCENVGDVGVMSLAYGCPDLRTVDLCGCVQITDDSVIALANKCPHLRSLGLYYCKNITDRAMYSLAQSKVNNRMWRTVKGGRESDEDGLRTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVHAHHRAFSTFLHLAH* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0578 373 Gene3D - 38 79 - -
Lan14g0578 373 SMART LRR_CC_2 181 207 IPR006553 -
Lan14g0578 373 SMART LRR_CC_2 234 259 IPR006553 -
Lan14g0578 373 SMART LRR_CC_2 208 233 IPR006553 -
Lan14g0578 373 SMART LRR_CC_2 129 154 IPR006553 -
Lan14g0578 373 SMART LRR_CC_2 102 128 IPR006553 -
Lan14g0578 373 SMART LRR_CC_2 155 180 IPR006553 -
Lan14g0578 373 SMART LRR_CC_2 303 328 IPR006553 -
Lan14g0578 373 SMART LRR_CC_2 260 285 IPR006553 -
Lan14g0578 373 Gene3D Ribonuclease Inhibitor 80 304 IPR032675 -
Lan14g0578 373 PANTHER UNCHARACTERIZED 1 354 - -
Lan14g0578 373 SUPERFAMILY F-box domain 41 77 IPR036047 GO:0005515
Lan14g0578 373 Pfam Leucine Rich repeat 234 257 IPR001611 GO:0005515
Lan14g0578 373 Pfam Leucine Rich repeat 208 231 IPR001611 GO:0005515
Lan14g0578 373 Pfam Leucine Rich repeat 259 283 IPR001611 GO:0005515
Lan14g0578 373 PANTHER F-BOX SKP2A-LIKE PROTEIN 1 354 - -
Lan14g0578 373 SUPERFAMILY RNI-like 81 284 - -
Lan14g0578 373 Pfam F-box-like 42 75 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0578 Lan-Chr14 12134274 12138209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0578 K03875 - gmx:100797840 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0578 14 12134274 12138209 Lan14g0578 14 12134274 12138209 ECH
Lan15g0741 15 16384294 16396153 Lan14g0578 14 12134274 12138209 LSH
Lan14g0578 14 12134274 12138209 Lan3g1615 3 27963469 27967135 LSH