Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0741 ATGGTTGGCAAGGAGAACCTGAAAACTGAGGACTTGAACTTGTGCTTTGAGAAGCTTATGATGATGGCTAGTGGGACAGGAGGGAACATGAAAGTTGGGGTGATAACTGAATGGAAGGATATTCCTATTGAGCTATTGGTGCAAATTTTGTCTCTTGTTGATGATCAAACTGTGATCATAGCTTCTGGAGTTTGTCGTGGTTGGAGAGATGCTATTTACTTTGGTGTTTCACGTCTATCACTCTCATGGTGTAGCAAGAACATGAACAATTTGGTCCTGTCTCTTGTTCCCAAGTTTGCAAAACTGCAAACTCTAATCCTACGTCAAGACAAGCCTCAACTAGAGGACAATGCTGTTGAGACTATTGCAAACTGCTGTCATGAGCTGCAGATCCTTGACCTCAGCAAAAGTTTCAAGCTTACCGATCGCTCATTGTATGCCATAGCTCATGGTTGTTGCGATCTTACGAAACTAAACATCAGTGGATGTTCTGCATTCAGTGACAGCGCTCTGGCTTATCTTGCTAGTTTCTGCAGAAAACTTAAGGTTCTAAATCTTTGTGGCTGTGTTAGAACAGCATCTGATACTGCATTACAGGCTATTGGACATTACTGCAATCAGTTACAGTCTTTGAATCTTGGGTGGTGTGACAATGTTGGTGATGTTGGAGTGATGAGTTTAGCATATGGGTGTCCTGATCTTAGGACAGTTGATTTGTGTGGTTGTGTCCGTATAACAGATGATAGTGTCATTGCTTTGGCCAACAAATGCCCCCATTTAAGGTCTCTTGGTTTATACTACTGTAAAAACATCACAGATAGGGCAATGTATTCCTTGGCACAAAGCAAAGTGAAGAACAGGATGTGGGGTACTGTGAAAGGAGAAAGTGATGAGGATGGCTTAAGGACCTTGAACATTAGCCAATGCACTGCACTTACCCCTTCTGCTGTTCAAGCTGTTTGTGACTCATTCCCTTCCCTTCACACATGTTCAGGGAGGCATTCACTCATCATGAGTGGCTGTCTCAACTTGACTTCTGTTCATTGTGCCTGTGCTGTCCATGCGCACCACCGCGCATTCACCACTTTCCTTCATCCTGCTCATTGA 1107 0.4354 MVGKENLKTEDLNLCFEKLMMMASGTGGNMKVGVITEWKDIPIELLVQILSLVDDQTVIIASGVCRGWRDAIYFGVSRLSLSWCSKNMNNLVLSLVPKFAKLQTLILRQDKPQLEDNAVETIANCCHELQILDLSKSFKLTDRSLYAIAHGCCDLTKLNISGCSAFSDSALAYLASFCRKLKVLNLCGCVRTASDTALQAIGHYCNQLQSLNLGWCDNVGDVGVMSLAYGCPDLRTVDLCGCVRITDDSVIALANKCPHLRSLGLYYCKNITDRAMYSLAQSKVKNRMWGTVKGESDEDGLRTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVHAHHRAFTTFLHPAH* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0741 368 SUPERFAMILY RNI-like 77 280 - -
Lan15g0741 368 Pfam Leucine Rich repeat 256 280 IPR001611 GO:0005515
Lan15g0741 368 Pfam Leucine Rich repeat 205 228 IPR001611 GO:0005515
Lan15g0741 368 Pfam Leucine Rich repeat 231 254 IPR001611 GO:0005515
Lan15g0741 368 SMART LRR_CC_2 205 230 IPR006553 -
Lan15g0741 368 SMART LRR_CC_2 298 323 IPR006553 -
Lan15g0741 368 SMART LRR_CC_2 178 204 IPR006553 -
Lan15g0741 368 SMART LRR_CC_2 99 125 IPR006553 -
Lan15g0741 368 SMART LRR_CC_2 152 177 IPR006553 -
Lan15g0741 368 SMART LRR_CC_2 126 151 IPR006553 -
Lan15g0741 368 SMART LRR_CC_2 257 282 IPR006553 -
Lan15g0741 368 SMART LRR_CC_2 231 256 IPR006553 -
Lan15g0741 368 Pfam F-box domain 38 72 IPR001810 GO:0005515
Lan15g0741 368 Gene3D - 35 76 - -
Lan15g0741 368 SMART fbox_2 41 81 IPR001810 GO:0005515
Lan15g0741 368 SUPERFAMILY F-box domain 38 76 IPR036047 GO:0005515
Lan15g0741 368 PANTHER UNCHARACTERIZED 1 349 - -
Lan15g0741 368 Gene3D Ribonuclease Inhibitor 77 299 IPR032675 -
Lan15g0741 368 PANTHER F-BOX SKP2A-LIKE PROTEIN 1 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0741 Lan-Chr15 16384294 16396153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0741 K03875 - gmx:100797840 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0741 15 16384294 16396153 Lan14g0578 14 12134274 12138209 LSH
Lan15g0741 15 16384294 16396153 Lan3g1615 3 27963469 27967135 LSH