Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan3g1107 | ATGGCTATCGCTTTCTTCTCTCTCGCACTCTTCCTTTTCCTCTCTCTTGATTCTGATTTACCTTATTCTCCTACTTCTTCTGTATCTGCTGCTTCTTCCGAAGGCGTCGAGGTGCAGATTACTTATGGATCGGTGTTGAAGCTTATGCATGAGAAGACGAAAGTTCGGTTGCATTCTCATGAGGTGCCATATGGTTCTGGAAGTGGACAACAATCGGTTACTGGTTTTCCCAGTGTTGATGATTCCAATAGTTACTGGGTTGTTAAACCTGAGCTAGAATCTTCTGCTAAACAAGGTGACACCATTAAAAGTGGAACACTCATTAGACTGCAGCATATGAGGACGAGGAAGTGGCTGCATAGCCATTTGCATGCATCCCCAATATCACACAATCTTGAGGTGAGCTGCTTTGGAGGAGAGACCGAGTCTGACACTGGGGACCATTGGAAGCTTACAATAGAAGGAAGCGGGAAGACTTGGAAGCAAGATCAAAAGATTCGGCTTCAACATGTTGACACTGGAGGCTATCTGCACAGTCATGATAAGAAATACACTCGAATTGCTGGAGGGCAGCAGGAGGTTTGTGGTGTTCGAGAAAAGCGTGCCGAGAATGTCTGGTTGGCAGCAGAAGGCGTCTACCTTCCAATTACTGAAAGCAAATGA | 663 | 0.457 | MAIAFFSLALFLFLSLDSDLPYSPTSSVSAASSEGVEVQITYGSVLKLMHEKTKVRLHSHEVPYGSGSGQQSVTGFPSVDDSNSYWVVKPELESSAKQGDTIKSGTLIRLQHMRTRKWLHSHLHASPISHNLEVSCFGGETESDTGDHWKLTIEGSGKTWKQDQKIRLQHVDTGGYLHSHDKKYTRIAGGQQEVCGVREKRAENVWLAAEGVYLPITESK* | 221 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan3g1107 | 220 | PANTHER | BNAA09G55850D PROTEIN | 1 | 219 | - | - | |
| Lan3g1107 | 220 | PANTHER | STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN | 1 | 219 | - | - | |
| Lan3g1107 | 220 | SMART | mir_2 | 99 | 154 | IPR016093 | - | |
| Lan3g1107 | 220 | SMART | mir_2 | 37 | 91 | IPR016093 | - | |
| Lan3g1107 | 220 | SMART | mir_2 | 157 | 211 | IPR016093 | - | |
| Lan3g1107 | 220 | Pfam | MIR domain | 57 | 203 | IPR016093 | - | |
| Lan3g1107 | 220 | ProSiteProfiles | MIR domain profile. | 99 | 154 | IPR016093 | - | |
| Lan3g1107 | 220 | ProSiteProfiles | MIR domain profile. | 37 | 91 | IPR016093 | - | |
| Lan3g1107 | 220 | Gene3D | - | 24 | 220 | - | - | |
| Lan3g1107 | 220 | ProSiteProfiles | MIR domain profile. | 157 | 211 | IPR016093 | - | |
| Lan3g1107 | 220 | SUPERFAMILY | MIR domain | 38 | 211 | IPR036300 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan3g1107 | Lan-Chr3 | 23429687 | 23433166 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan3g1107 | - | - | gsj:114414928 | 370.163 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan15g1058 | 15 | 19617415 | 19620106 | Lan3g1107 | 3 | 23429687 | 23433166 | LSH | |
| Lan14g0827 | 14 | 15054359 | 15057537 | Lan3g1107 | 3 | 23429687 | 23433166 | LSH |