Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan14g0827 | ATGGCTATCGGTTTCTTCGGTCTCGCCATCTTCCTTTTCCTCTCCCTCGATTCTGATATCCCTCATTCTCCTACCTCTTCTGTTTCTGCTGCTTCCTCTGAAGGCGTAGAGGTTGAGATTAGTTATGGATCGGTATTGAAGCTAATGCATGAGAAGACCAGAGTTCGGTTGCATTCTCATGAAGTGCCTTATGGTTCTGGCAGTGGCCAACAATCAGTTACTGGTTTTCCCGGTGTCGACGATTCTAACAGCTACTGGATTGTTAAACCTCAGCTGGAATCTTCAGCTAAACAAGGTGACACCATTAAAAGTGGAACAATCATTAGACTACAGCACATGAGGACGAGGAAGTGGCTGCATAGCCATTTGCATGCATCCCCAATTTCAGGCAATCTTGAGGTGAGCTGCTACGGAGGAGAGTCTGAGTCTGACACTGGGGACCACTGGAAACTTACAATAGAAGGAAGTTGGAAGACTTGGAAGCAAGATCAAAAGATTAGGCTTCAACATGTGGACACCAGAGGCTATCTACACAGTCATGATAAGAAATACACTAGAATTGCTGGGGGACAGCAGGAGTGCCATGGTGATTGTCCATCTATATCTTGA | 609 | 0.4581 | MAIGFFGLAIFLFLSLDSDIPHSPTSSVSAASSEGVEVEISYGSVLKLMHEKTRVRLHSHEVPYGSGSGQQSVTGFPGVDDSNSYWIVKPQLESSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCYGGESESDTGDHWKLTIEGSWKTWKQDQKIRLQHVDTRGYLHSHDKKYTRIAGGQQECHGDCPSIS* | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan14g0827 | 202 | PANTHER | STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN | 1 | 196 | - | - | |
| Lan14g0827 | 202 | SMART | mir_2 | 155 | 199 | IPR016093 | - | |
| Lan14g0827 | 202 | SMART | mir_2 | 99 | 154 | IPR016093 | - | |
| Lan14g0827 | 202 | SMART | mir_2 | 37 | 91 | IPR016093 | - | |
| Lan14g0827 | 202 | ProSiteProfiles | MIR domain profile. | 99 | 154 | IPR016093 | - | |
| Lan14g0827 | 202 | Gene3D | - | 24 | 200 | - | - | |
| Lan14g0827 | 202 | PANTHER | MIR MOTIF, GLYCOSYLTRANSFERASE 39-LIKE PROTEIN-RELATED | 1 | 196 | - | - | |
| Lan14g0827 | 202 | Pfam | MIR domain | 57 | 148 | IPR016093 | - | |
| Lan14g0827 | 202 | ProSiteProfiles | MIR domain profile. | 37 | 91 | IPR016093 | - | |
| Lan14g0827 | 202 | SUPERFAMILY | MIR domain | 38 | 196 | IPR036300 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan14g0827 | Lan-Chr14 | 15054359 | 15057537 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan14g0827 | - | - | gsj:114414928 | 322.783 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan15g1058 | 15 | 19617415 | 19620106 | Lan14g0827 | 14 | 15054359 | 15057537 | LSH | |
| Lan14g0827 | 14 | 15054359 | 15057537 | Lan3g1107 | 3 | 23429687 | 23433166 | LSH |