Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1058 ATGGCTATCGGTTTCTTCGCTCTCGCAATCTTCCTTTTCCTCTCCCTCGATTCTGATACTCCTCATTCTCCTACCTCTTCCGTCTCCGCTGCTTCCTCCGAAGGCGTCGAGATTACTTATGGATCGGTTTTGAAGGTGATGCATGAGAAGAGTAAAGTTCGATTGCATTCTCATGAAGTGCCATATGGTAGTGGCAGTGGGCAACAATCAGTTACTGGTTTTCCCGGTGTCGACGATTCTAATAGTTATTGGATTGTTAAACCTCAGCTGGAATCTTCTGCTAAACAAGGTGACACCATCAAAAGTGGAACAATTATTAGACTGCAGCATATGAGGACGAGGAAGTGGCTCCATAGCCACTTGCATGCATCCCCAATATCAGGCAATCTTGAGGTTAGCTGCTTTGGAGGAGAGACTGAGTCTGACACTGGTGACCATTGGAAGCTTACAATAGAAGGAAGTGGGAAGACTTGGAAGCAAGATCAAAAGTTTCGGCTTCAACATGTGGACACTGGAGGCTATCTGCACAGCCATGATAAGAAATACACTCGAATTGCTGGGGGGCAGCAGGAGGTTTGTGGTGTTCGTGAAAAGCGTGCTGAGAATGTCTGGTTGGCAGCAGAAGGAGTCTACCTTCCAGTTACTGAAAGCAAATGA 657 0.4658 MAIGFFALAIFLFLSLDSDTPHSPTSSVSAASSEGVEITYGSVLKVMHEKSKVRLHSHEVPYGSGSGQQSVTGFPGVDDSNSYWIVKPQLESSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGETESDTGDHWKLTIEGSGKTWKQDQKFRLQHVDTGGYLHSHDKKYTRIAGGQQEVCGVREKRAENVWLAAEGVYLPVTESK* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1058 218 Pfam MIR domain 55 201 IPR016093 -
Lan15g1058 218 Gene3D - 23 218 - -
Lan15g1058 218 SMART mir_2 155 209 IPR016093 -
Lan15g1058 218 SMART mir_2 35 89 IPR016093 -
Lan15g1058 218 SMART mir_2 97 152 IPR016093 -
Lan15g1058 218 ProSiteProfiles MIR domain profile. 35 89 IPR016093 -
Lan15g1058 218 ProSiteProfiles MIR domain profile. 97 152 IPR016093 -
Lan15g1058 218 PANTHER BNAA09G55850D PROTEIN 1 217 - -
Lan15g1058 218 SUPERFAMILY MIR domain 33 209 IPR036300 -
Lan15g1058 218 ProSiteProfiles MIR domain profile. 155 209 IPR016093 -
Lan15g1058 218 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1058 Lan-Chr15 19617415 19620106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1058 - - gmx:100811638 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1058 15 19617415 19620106 Lan14g0827 14 15054359 15057537 LSH
Lan15g1058 15 19617415 19620106 Lan3g1107 3 23429687 23433166 LSH