Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0814 ATGGGTACCATTAAATCATGGAGAAAAGCCTATGGTGCCATCAAAGACACCACCAAAGTTGGTCTTGCACATGTCAATAGCGATTACGCGGATTTGGACGTTGCAATAGTGAAGGCTACGAATCATGTTGAGTGTCCTCCCAAAGAGAGACACCTAAGAAAGGTTCTGTTTGCCACATCTGCTGTTCGACCTAGGGCTGATGTTGCTTACTGTCTTCATGCCCTTTCACGCCGAATGACCAAGACGCGAAATTGGACGGTGGCATTGAAAACATTGATAGTCATCCATAGGTTGTTGAGGGAGGGTGATCCTACTTTTAGAGAAGAACTTCTGAATTTCTCACGGAAAGGACACATACTCCAACTTTCCAATTTCAAGGATGATTCTAGCCCAATTGCGTGGGATTGCTCTGCCTGGGTACGCACTTATGCATTATTTTTGGAAGAAAGGCTTGAATGTTTCCGTATTCTGAAGTATGATATTGAAGCCGAGCGTTTAAACAAGCCTGCCCAAGGGCAGGAGAAGGGGTACAGCAAGACCAGGGATCTGGATAGTGAGAAGCTAATGGAGCAGTTGCCTGCTTTGCAGCAGCTGCTCTATCGACTTGTTGGTTGTCGGCCAGAAGGAGCAGCTGTTAGCAATAATGTGTTGCAATATGCTCTGGCATTGGTACTGAAAGAGAGCTTTAAGATTTATTGTGCTATTAATGACGGCATTATCAATCTCGTTGATAAGTTTTTTGAGATGCCCAGACATGAAGCTATCAAAGCTCTTGATGCTTACAAACGTGCGGGTCAGCAGGCAGAAAGTCTTTCTGATTTCTATGAAGTTTGCAAAGGATTGCAAATTGCTAGGAATTTTCAGTTTCCGGTCTTAAGAGAGCCTCCACAATCTTTTCTTACAACCATGGAAGAGTACATTAGGGAGGCACCGCGTGTCGTTACAGTTCCAAGCGAGCCATTATTGTTGACTTACAGACCAGAAGAAGCCCTTGAAATTAAAGACACTAAATTATCTGAAGAAGAACAAGAGCCATCATTTCATGTCGATAACATTGTCGTGTCGAATTCTGAGCCTGCACCTCCACCACCACCTCAAAATTTTGAAATTGGAGACTTACTGGGATTGAATGACACTGCCCCTAATGAATCATCCATAGAGGAAAGAAATGCTTTTGCCCTTGCCATAGTGCCCACTGAAACTGGTGCTACTTCAGCTTTTAACCCAATTGCTGCACAAACAAAAGATTTTGATCCAACTGGATGGGAACTTGCACTGGTCACTGCTCCAAGTACTGATATTTCTTCAGTCAATGAGAGACAATTGGCTGGTGGGTTGGACACTCTCACTCTCAACAGCTTGTACGATGAAGCAGCATACAGGTCTGCGCAGCAACCCATCTATGGAGCACCGGCGGCTCCAAATCCATTTGAAGTGCAAGATCCATTTGTTTTATCAACCAGCGTCCTTCCGACACCGAATGTCCAAATTTCATCAATGGGGCAACAGCAAGTAAATCCATTTGGTCCTGTACAACCTTTTCAGCAGCCACAGCAGCAGCAACAGCATATGTTGATGAACCCGGCGAATCCCTTTGTCAATGCAACAGGATATGAACCATTTCCTGCAAACCATGTTTCTCAGCCACAGAATAACAATCCATTTGGAACCCCAGGCTTGTTATAA 1686 0.4442 MGTIKSWRKAYGAIKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKVLFATSAVRPRADVAYCLHALSRRMTKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSRKGHILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLNKPAQGQEKGYSKTRDLDSEKLMEQLPALQQLLYRLVGCRPEGAAVSNNVLQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALDAYKRAGQQAESLSDFYEVCKGLQIARNFQFPVLREPPQSFLTTMEEYIREAPRVVTVPSEPLLLTYRPEEALEIKDTKLSEEEQEPSFHVDNIVVSNSEPAPPPPPQNFEIGDLLGLNDTAPNESSIEERNAFALAIVPTETGATSAFNPIAAQTKDFDPTGWELALVTAPSTDISSVNERQLAGGLDTLTLNSLYDEAAYRSAQQPIYGAPAAPNPFEVQDPFVLSTSVLPTPNVQISSMGQQQVNPFGPVQPFQQPQQQQQHMLMNPANPFVNATGYEPFPANHVSQPQNNNPFGTPGLL* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0814 561 MobiDBLite consensus disorder prediction 541 561 - -
Lan3g0814 561 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Lan3g0814 561 SUPERFAMILY GAT-like domain 179 309 - -
Lan3g0814 561 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Lan3g0814 561 Gene3D ANTH domain 173 322 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lan3g0814 561 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 542 IPR045192 GO:0048268|GO:0072583
Lan3g0814 561 MobiDBLite consensus disorder prediction 539 561 - -
Lan3g0814 561 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Lan3g0814 561 SMART enth_2 30 161 IPR013809 -
Lan3g0814 561 CDD ANTH_N 32 154 - -
Lan3g0814 561 PANTHER OS05G0549000 PROTEIN 1 542 - -
Lan3g0814 561 Gene3D - 6 161 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0814 Lan-Chr3 15261005 15269071 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0814 - - gmx:100776929 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1143 12 17756651 17761875 Lan3g0814 3 15261005 15269071 PCT
Lan1g1138 1 21455560 21460884 Lan3g0814 3 15261005 15269071 PCT
Lan1g0252 1 1842283 1847609 Lan3g0814 3 15261005 15269071 PCT
Lan3g0814 3 15261005 15269071 Lan12g1143 12 17756651 17761875 PCT
Lan3g0814 3 15261005 15269071 Lan1g1138 1 21455560 21460884 PCT
Lan3g0814 3 15261005 15269071 Lan1g0252 1 1842283 1847609 PCT