Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1138 ATGTCCGGTGGCTCGCAGAATAGTCTGAGAAAAGCACTCGGAGCTCTTAAGGACACCACAACAGTTTCATTGGCTAAAGTCAACAGTGATTACAAGGAATTGGACATTGCTATAGTTAGAGCCACAAATCATGTTGAACGTCCGGCAAAGGAAAAACATATTAGGGCAATATTTTCAGCAATCTCAGCTACAAGACCTCGGGCTGATGTTGCATATTGCATTCATGCTCTTGCAAGGAGATTGTCAAGGACACATAACTGGGCGGTTGCATTGAAGACTTTAATTGTTATTCACCGTGCTCTGAGGGAAGTGGATCCCACATTTCATGAAGAACTAATTAATTATGGCAGAAGTAGAAGTCATATGCTCAATATGTCTCATTTCAAAGATGATTCCAGCCCCAATGCATGGGATTATTCTGCATGGGTCCGCACTTATGCGTTATTTTTGGAGGAAAGGCTGGAATGTTTTCGTGTGTTGAAGCATGACATTGAGGCAGAACGTTTGAGGACCAAAGATTTGGATACAGCTGAATTGCTAACGCAGTTGCCAGCTTTACAACAACTTCTCTTACGAGTTCTTCGTTGCCAGCCACAAGGGGCAGCTGTACATAACTTCATCATTCATTTATCACTCTCGATGGTTGCTTCGGAAAGCATTAAAATTTATCAAGCTATTAGTGATGGCACAGTCAACCTGGTTGATAAGTTTTTTGAGATGCAACGCCATGATGCTCTGAAAGCTCTTGATATATACAGGACTGTTGGACAGCAGGCTGAGAGACTGTCAGAGTTTTATGAAATATGTCGTAATCTTGATATTGGAAGTGAAGAGAAGTTTATTAAAGTTGAGGAGCCTCCTTCGTCATTTCTGCAAGCCATGGAAGAGTATGTGAAAGATGCTCCCCAGGGATTGGTAGTTCGCAAGGATCAGGCTGCTGAAAACAAAATTTGCTCTCCAAAAGAAGTCTTGGCTATTGAATACAAACATACATCAGAAGAGGAGGAACTTCCACCCTCACCCACTCCACCTCCACCACCTGAACCTGTGAAAGTGGAAGCACCACCAGTTCAATCACCACCTGATTTGCTGAATTTGGAGGACTCTGTTCCTGCTGCTTTAAAGTTGGAAGAGAAGAATGCCATGGCTTTAGCAATTGTCCCTGTTGCTGATCAGCCACTTCCTGCTGTTCCAATTCAAGCAAATGGAACTACAGGCTGGGAATTGGCACTTGTTACAGCTCCTAGTTCAAATGAGAGTGCTGCGACAGCTAGCAAACTGGCTGGAGGTCTGGACAAACTTACACTAGACAGCCTATATGATGATGCACTCAGGAGAAACAACCAAAATGTCAGCTATAACCCATGGGAGCAAGCGTCGATGGGAGGCATGATGCAACCAACAATGCACGATCCATTTTTCGCCTCTAATACAATGGCAGCTCCACCTTCTGTTCAGATGGCAGCTATTTCCAACCAACAGCAGGCTTTCATGTTTCATCAGCAGCAGCAGCACATGATGATGGCCCCTCACCAATCATCTGGAAATCCTTTCGGAAATCCTTATGGGGCCACTGTCCACCCATATGGCTCAGGTATGCCTGTTCAATCATACAATCCATATACAGGCCACATCTAG 1638 0.4426 MSGGSQNSLRKALGALKDTTTVSLAKVNSDYKELDIAIVRATNHVERPAKEKHIRAIFSAISATRPRADVAYCIHALARRLSRTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNMSHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKHDIEAERLRTKDLDTAELLTQLPALQQLLLRVLRCQPQGAAVHNFIIHLSLSMVASESIKIYQAISDGTVNLVDKFFEMQRHDALKALDIYRTVGQQAERLSEFYEICRNLDIGSEEKFIKVEEPPSSFLQAMEEYVKDAPQGLVVRKDQAAENKICSPKEVLAIEYKHTSEEEELPPSPTPPPPPEPVKVEAPPVQSPPDLLNLEDSVPAALKLEEKNAMALAIVPVADQPLPAVPIQANGTTGWELALVTAPSSNESAATASKLAGGLDKLTLDSLYDDALRRNNQNVSYNPWEQASMGGMMQPTMHDPFFASNTMAAPPSVQMAAISNQQQAFMFHQQQQHMMMAPHQSSGNPFGNPYGATVHPYGSGMPVQSYNPYTGHI* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1138 545 MobiDBLite consensus disorder prediction 331 358 - -
Lan1g1138 545 CDD ANTH_N 34 157 - -
Lan1g1138 545 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Lan1g1138 545 SUPERFAMILY GAT-like domain 170 300 - -
Lan1g1138 545 Pfam ANTH domain 33 300 IPR011417 GO:0005543
Lan1g1138 545 Gene3D ANTH domain 164 312 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lan1g1138 545 SMART enth_2 32 164 IPR013809 -
Lan1g1138 545 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 525 IPR045192 GO:0048268|GO:0072583
Lan1g1138 545 PANTHER OS06G0175500 PROTEIN 1 525 - -
Lan1g1138 545 MobiDBLite consensus disorder prediction 337 356 - -
Lan1g1138 545 SUPERFAMILY ENTH/VHS domain 33 165 IPR008942 -
Lan1g1138 545 Gene3D - 7 163 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1138 Lan-Chr1 21455560 21460884 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1138 K20043 - gmx:100815239 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1143 12 17756651 17761875 Lan1g1138 1 21455560 21460884 LSH
Lan1g1138 1 21455560 21460884 Lan1g0252 1 1842283 1847609 LSH
Lan1g1138 1 21455560 21460884 Lan3g0814 3 15261005 15269071 PCT
Lan3g0814 3 15261005 15269071 Lan1g1138 1 21455560 21460884 PCT