Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0924 ATGTCAAGTAATGGATGCAGCATAGTTTGGTTCAGAAGGGATCTGAGGGTGGAGGATAACCCAGCACTGATGGCAGGAGTAAGAGCAGGAGCTGTTGTTGCTGTTTTCATATGGGCTCCTGAAGAAGAAGGTCAATATCAACCTGGAAGGGTTTCAAGGTGGTGGCTGAAACACAGTTTGGCTTATCTTGATTCATCTTTGAGAAATCTTGGCACTCCTCTTATCACCAAGAGATCCACTGATAGTGTTTCTGCACTATTAGAGGTTGTTAAGTCCACTGGTGCTACTCAACTTTTCTTTACCCACTTATATGATCCATTGTCACTTATCAGGGATCACCGAGCAAAGGAGGTTCTAACTGCTCATGGCATAACAGTACGTTCCTTTAATTCAGACTTATTGTATGAACCATGGGATGTCAATGATGAACATGGCCAACCATTCACAACTTTTGATGCTTTTTGGGGAAGATGCCTTAACATGCCTTATGACCCACCAGCACCTTTTCTCCCACCTAAAAGGATTATTCCAGGAGATATATCAAGGTGCTCTTGTGATGCATTGGTGTTTGAAGATGAATCAGAGAGGGCAAGCAATGCACTTCTTGCTCGAGCATGGTCCCCCGGGTGGAGCAATGCGGACAAGGCCTTGACGACATTCATAAACGGTCCACTAATTGAGTATTCCGAAAATCGCAGGAAGGCTGACAGTGCCACAACCTCATTTCTCTCCCCTCATTTGCATTTTGGTGAGGTGAGTGTCAAGAAAGTTTTCCATCTTGTTCGGATTAAGCAAGTGCTATGGGCCAATGAAGGAAACAAGGCTGGTGAGGAAAGTGTGAACTTGTTTCTCAAGTCTATTGGTCTTAGAGAGTATTCAAGGTACGTAAGTTTCAACCATCCCTATAGTCATGAAAGGCCTCTTCTAGGCCACCTCAAGTTTTTCCCTTGGGTAGTCAATGAAGGATATTTTAAGGCATGGAGGCAAGGCAGAACAGGCTACCCTTTGGTGGATGCTGGCATGAGAGAGTTGTGGGCCACTGGTTGGCTTCATGATCGGATACGTGTTGTAGTTTCGAGTTTCTTCGTGAAGGTTCTGCAGCTTCCTTGGAGATGGGGGATGAAATATTTCTGGGATACCCTCTTGGATGCTGATCTTGAGAGTGATGCTCTTGGTTGGCAGTACATAACTGGTACTCTACCCGATGGTCGCGAATTTGACAGAATAGATAATCCACAGTTTGAGGGATACAAATTTGATCCGAATGGAGAATATGTACGACGCTGGCTTCCTGAGCTTTCCAGATTACCAACTCAATGGATACATCATCCATGGAACGCACCAGAATCGGTACTCCAAGCTGCTGGTATAGAACTTGGTTCAAATTACCCTCTTCCGATTGTGGCAATAGACGAAGCGAAAGCAAGGTTGCAAGAAGCACTTATACAAATGTGGCAACAAGAAGCAGCTTATAGAGCTGCAACTGAAAATGGAACTGAGGAAGGGCTTGGAGAGTCATTTGAGTCAACTCCAATTGCTTTTCCTGAGGACATACAAATGGAGGAAGGACATGAATCTGTTAGGAACAATACCCCTGCAGCATCGACTCGGCGTTACGAGGATCAGATGGTCCCAAGCATCACTTCTTCATTGGTGAGAGTGGAAGGGGAAGAAACTTCTTTGGATGTTCAAAACTCAGCAGAAGAGAGCAGAGCTGAAGTTCCTATAAATGTGAATGCACAACAAAATACAAGAGAGACAGTGTTTCACACTGCTAACAGAAACACTCAACTACAGCATAATAACAATAATACAACGTGGTTTCGAAACGGAGCCGAAGATTCCACAGCGGAATCTTCAAGTAGTACTAGGAGAGAAAGGGATGGAGGAGAAGTTCCGGTATGGTCTCCGACGACTTCTAGTTACCCAGAGCCATTTGTAGATGATGAAAATGGTTTAGGAGGCAGTTCATCTTACTTGCAGAGGCATCCTCAGTCTCACCAATTGATGAATTGGACAAGGTTACCTCAGACTGGGTAA 2040 0.4466 MSSNGCSIVWFRRDLRVEDNPALMAGVRAGAVVAVFIWAPEEEGQYQPGRVSRWWLKHSLAYLDSSLRNLGTPLITKRSTDSVSALLEVVKSTGATQLFFTHLYDPLSLIRDHRAKEVLTAHGITVRSFNSDLLYEPWDVNDEHGQPFTTFDAFWGRCLNMPYDPPAPFLPPKRIIPGDISRCSCDALVFEDESERASNALLARAWSPGWSNADKALTTFINGPLIEYSENRRKADSATTSFLSPHLHFGEVSVKKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYVSFNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDGREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPTQWIHHPWNAPESVLQAAGIELGSNYPLPIVAIDEAKARLQEALIQMWQQEAAYRAATENGTEEGLGESFESTPIAFPEDIQMEEGHESVRNNTPAASTRRYEDQMVPSITSSLVRVEGEETSLDVQNSAEESRAEVPINVNAQQNTRETVFHTANRNTQLQHNNNNTTWFRNGAEDSTAESSSSTRRERDGGEVPVWSPTTSSYPEPFVDDENGLGGSSSYLQRHPQSHQLMNWTRLPQTG* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0924 679 MobiDBLite consensus disorder prediction 654 679 - -
Lan2g0924 679 Gene3D HUPs 8 206 IPR014729 -
Lan2g0924 679 MobiDBLite consensus disorder prediction 554 618 - -
Lan2g0924 679 PANTHER CRYPTOCHROME 1 603 IPR002081 -
Lan2g0924 679 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 301 502 - -
Lan2g0924 679 ProSitePatterns DNA photolyases class 1 signature 1. 332 344 IPR018394 -
Lan2g0924 679 PRINTS DNA photolyase signature 332 348 IPR002081 -
Lan2g0924 679 PRINTS DNA photolyase signature 352 370 IPR002081 -
Lan2g0924 679 PRINTS DNA photolyase signature 391 405 IPR002081 -
Lan2g0924 679 MobiDBLite consensus disorder prediction 554 679 - -
Lan2g0924 679 Pfam DNA photolyase 7 163 IPR006050 -
Lan2g0924 679 Pfam Blue/Ultraviolet sensing protein C terminal 511 624 IPR020978 -
Lan2g0924 679 Pfam FAD binding domain of DNA photolyase 283 480 IPR005101 -
Lan2g0924 679 Coils Coil 470 490 - -
Lan2g0924 679 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 178 IPR036155 -
Lan2g0924 679 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 196 488 IPR036134 -
Lan2g0924 679 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 5 134 IPR006050 -
Lan2g0924 679 ProSitePatterns DNA photolyases class 1 signature 2. 352 371 IPR018394 -
Lan2g0924 679 Gene3D - 134 293 - -
Lan2g0924 679 PANTHER CRYPTOCHROME-1 1 603 - -
Lan2g0924 679 TIGRFAM crypt_chrom_pln: cryptochrome, plant family 6 481 IPR014134 GO:0009785|GO:0009882
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0924 Lan-Chr2 19994022 19998472 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0924 K12118 - gmx:100786551 1180.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0924 2 19994022 19998472 Lan11g0463 11 3484841 3489464 LSH
Lan2g0924 2 19994022 19998472 Lan14g0655 14 13521385 13525699 PCT
Lan14g0655 14 13521385 13525699 Lan2g0924 2 19994022 19998472 PCT