Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0655 ATGCATGTGTGTGTGAATAGTTTGTGTAGAGATATGTCAAGTGGTGGATGCAGCATAGTATGGTTCAGGAGAGATCTAAGGGTAGAAGATAATCCAGCACTGAGTGCAGCAGTTAGAGCTGGAACTGTGGTTGCACTTTTCATATGGGCACCTGAAGAAGAGGGTCAATATCAACCTGGTAGAGTTTCTAGGTGGTGGCTCAAGCATAGTTTGGCTCATCTTGATTCATCTCTTAGAAGTCTTGGTACTTCTCTTATCACTAAGAGATCAACTAATAGTGTTTCATCTCTACTAGATGTTGTTAAGTCCACTGGAGCCACTCAAGTCTTTTTTAACCACTTATATGATCCCTTGTCACTTATCAGGGATCATCAAGCAAAGGAGGTTCTGACTTCTCACGGCATTACGGTACTATCCTTCAACGCGGATTTGTTATATGAACCATGGGATATCAACGATGCCTGTGGCCAACCATTCACAACTTTTGCTGCCTTTTGGGAAAGATGCCTTAGCATGCCTTATGACCCAGACTCACCTCTTCTACCTCCTAAGAAGATTATTCCAGGTGATGTATCAAGGTGCATGTCTGATATATTGGTGCTTGAAGATGAATTAGAGAAGGCAAGCAATGCACTTCTTGCTCGAGCATGGTCACCTGGGTGGAGCAACGCTAACAAGGCTTTGACCACATTCATAAATGGTCCACTGCTTGAGTATTCGAAAAATCGCAAGAAGGCTGACAGTGCCACAACCTCATTTCTTTCCCCCCATTTGCATTTTGGTGAGTTGAGTGTGAAAAAGGTTTTCCATCTTGTCTGCATCAAGCAAATTTTATGGGCAAACGAAGGAAACAAGGCCGGTGAAGAAAGCGTTAACTTGTTCCTCCAGTCTATTGGCCTTAGAGAGTATTCAAGGTACATTTGTTTCAACCACCCCAATAGTCATGAAAGGCCTCTTCTAGGACAGCTTAAGTTATTTCCTTGGGTAGTGAATGAAGGCTATTTTAAGGCATGGAGGCAAGGCAGAACTGGTTACCCATTGGTGGATGCTGGCATGAGGGAGTTGTGGGCCACGGGTTGGCTGCACGATCGTATACGTGTCGTGGTTTCCAGTTTCTTTGTGAAGGTTTTGCAGCTTCCCTGGAGATGGGGAATGAAATATTTCTGGGATACCCTCTTGGATGCAGATCTTGAGAGTGATGCTCTCGGTTGGCAGTACATATCTGGTTCTCTCCCGGATGGCCGTGAATTAGACCGGATAGATAATCCACAGTTTGAGGGATACAAATTTGATCCAAATGGAGAATATGTACGGCGCTGGCTTCCAGAGCTTGCTAGATTACCAACTGAATGGATACATCATCCATGGAATGCACCAGAAGCGGTACTCGAAGCTGCTGGAGTTGAGCTTGGATCAAACTATCCCCTTCCAATTGTAGGAATAGACGCAGCAGAAACCAGATTAGAAGAAGCACTATCAGAAATGTGGCGACTAGAAGCAGCTTCAAGAGCTGTCACTGAAAATGGAACCGAGGAAGGGCTTGGTGACTCATCGGAATCGACTGCTGTTGCTTTTCCTCAAGACATCCAAATGGAGGAAAGTGATGAACCTGCAAGGAACAATTCTCCTCCTCTTGCTCGACACTACCAGGATCAGATGGTTCCAAGTATCACTTCTTCCCTGACGAGAGTTGAGGAGGAAGTAACTTCTGATATTAGAAACTCAGCAGAACAAAGCAGAGCTGAAGTACCAATAAACGTAAACACGCGGCAAAATGCAAGAGATGCATTGAACGAAAGGATGTTGCAGACTGCTCAAAGGAATGCACAACTACACTACAATAGTGGAATGCACATGAGAAATGCAGCTGAAGATTCCGCAGTAGAATCGTCAAGTATTAGTAGGAGGAGGGAGAGAGATGGAGGCGTAGTTCCAGAATGGTCTCCTTCGGCTTCTAGTTACTCGGAGCAGTTAGTAGGAGATGAAAATGGCATAGCTAGCAGTTCATCTTACTTGCAAAGGCATCCTCAGTCTCACCAATTGCTGAATTGGAGGGGACTACCTCAGACCGGGTGA 2076 0.4504 MHVCVNSLCRDMSSGGCSIVWFRRDLRVEDNPALSAAVRAGTVVALFIWAPEEEGQYQPGRVSRWWLKHSLAHLDSSLRSLGTSLITKRSTNSVSSLLDVVKSTGATQVFFNHLYDPLSLIRDHQAKEVLTSHGITVLSFNADLLYEPWDINDACGQPFTTFAAFWERCLSMPYDPDSPLLPPKKIIPGDVSRCMSDILVLEDELEKASNALLARAWSPGWSNANKALTTFINGPLLEYSKNRKKADSATTSFLSPHLHFGELSVKKVFHLVCIKQILWANEGNKAGEESVNLFLQSIGLREYSRYICFNHPNSHERPLLGQLKLFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPEAVLEAAGVELGSNYPLPIVGIDAAETRLEEALSEMWRLEAASRAVTENGTEEGLGDSSESTAVAFPQDIQMEESDEPARNNSPPLARHYQDQMVPSITSSLTRVEEEVTSDIRNSAEQSRAEVPINVNTRQNARDALNERMLQTAQRNAQLHYNSGMHMRNAAEDSAVESSSISRRRERDGGVVPEWSPSASSYSEQLVGDENGIASSSSYLQRHPQSHQLLNWRGLPQTG* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0655 691 MobiDBLite consensus disorder prediction 503 522 - -
Lan14g0655 691 Pfam FAD binding domain of DNA photolyase 294 492 IPR005101 -
Lan14g0655 691 MobiDBLite consensus disorder prediction 648 691 - -
Lan14g0655 691 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 203 497 IPR036134 -
Lan14g0655 691 Pfam Blue/Ultraviolet sensing protein C terminal 523 633 IPR020978 -
Lan14g0655 691 PANTHER CRYPTOCHROME 12 612 IPR002081 -
Lan14g0655 691 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 16 145 IPR006050 -
Lan14g0655 691 TIGRFAM crypt_chrom_pln: cryptochrome, plant family 17 493 IPR014134 GO:0009785|GO:0009882
Lan14g0655 691 Coils Coil 481 501 - -
Lan14g0655 691 ProSitePatterns DNA photolyases class 1 signature 1. 343 355 IPR018394 -
Lan14g0655 691 Gene3D - 145 304 - -
Lan14g0655 691 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 312 513 - -
Lan14g0655 691 MobiDBLite consensus disorder prediction 560 590 - -
Lan14g0655 691 PANTHER CRYPTOCHROME-1 12 612 - -
Lan14g0655 691 Pfam DNA photolyase 18 173 IPR006050 -
Lan14g0655 691 PRINTS DNA photolyase signature 343 359 IPR002081 -
Lan14g0655 691 PRINTS DNA photolyase signature 363 381 IPR002081 -
Lan14g0655 691 PRINTS DNA photolyase signature 402 416 IPR002081 -
Lan14g0655 691 MobiDBLite consensus disorder prediction 574 590 - -
Lan14g0655 691 ProSitePatterns DNA photolyases class 1 signature 2. 363 382 IPR018394 -
Lan14g0655 691 Gene3D HUPs 19 217 IPR014729 -
Lan14g0655 691 MobiDBLite consensus disorder prediction 623 691 - -
Lan14g0655 691 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 18 190 IPR036155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0655 Lan-Chr14 13521385 13525699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0655 K12118 - gmx:100797839 1178.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0655 14 13521385 13525699 Lan14g0655 14 13521385 13525699 ECH
Lan2g0924 2 19994022 19998472 Lan14g0655 14 13521385 13525699 PCT
Lan11g0463 11 3484841 3489464 Lan14g0655 14 13521385 13525699 PCT
Lan14g0655 14 13521385 13525699 Lan2g0924 2 19994022 19998472 PCT
Lan14g0655 14 13521385 13525699 Lan11g0463 11 3484841 3489464 PCT