Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0449 ATGGATCTGATTTTGGGTTTACCGGAGGACATAGCCAGAGAGTGTCTGATTCGAATTTCGTACCAGCAGTTCCCGACGGTAGCATCGGTGTGTAAAGGGTGGAAGACGGAGATTGAGTCACCGGTTTTTCGCCGTCAGCGGCGGAGCACGGGGCATGCCCAGAAAATCCTTATCATGGTTCAAACACGAACTGAACCGGAGAAGTCTAGAACCGGTTCAACAAAACCCATGTCGAACCTGGTTTATTTTCTAAGTGTGTTTGAACCGGAAACGGGTAAATGGAGCGAGTTGCCACCGCCACCCGGGTTCGAATCCGGTTTACCAATGTTTTGCCAGTTGGCTGGTATTGGACCGGATCTTGTTTTAATTGGCGGTCTGGACCGGATTTCGTGGAATGCTTCTAATTCTGTTTTTATTTATAACATGTTGACGGCGGAGTGGAGGTGTGGGTCCCACATGCCAGGTGTGGGGCGTAGTTTTTTTGGTTGTGTGTCTGACCCTCAAGGAATAGTTTTTGTGGCTGGTGGTCATGATGATGATAAGAATGCGCTAAAGTCCGTGTTGGCATATGATGTGATGTCTGACTTATGGGTATCTCTTCCGAACATGACGTCAGAGCATGATGAGTGCAAGGCGATGTTTCGTGGTGGGAGGCTTTATGTTGTTGGTGGTTATCCTACGGAGTCGCAAGGGCAATTTGGGAGGAGTGCGGAGGTATTTGATTTTGCCACGTGGCAATGGAGCACTTTGGAAGGGTTCTTGGATTGTGCCACATGTCTATTGACATTAGTTGACGATTATGGTGATGGTGATGAGAGAATTTATATTTGCTCTGATGGCGGGTTAATGACGACAATCAAGGATTTCGCGGGACAAAAGATAGCCACACTTCCACCTGAGATACGCCATGTGGCACATATTAAAGCATTTGATGGAGCAATTTTGGTGATTGGATCAAGTGGGTATGGTGAAGAACATATGAGTTTTGTGTTTGATGTGAAGAGTGATAATGGTTGGAGAAAATTGGACAACCCGCGAGGATTTAGGGGACATGTCCAAACAAGCTGGGTTTTCAAGATATAG 1083 0.4672 MDLILGLPEDIARECLIRISYQQFPTVASVCKGWKTEIESPVFRRQRRSTGHAQKILIMVQTRTEPEKSRTGSTKPMSNLVYFLSVFEPETGKWSELPPPPGFESGLPMFCQLAGIGPDLVLIGGLDRISWNASNSVFIYNMLTAEWRCGSHMPGVGRSFFGCVSDPQGIVFVAGGHDDDKNALKSVLAYDVMSDLWVSLPNMTSEHDECKAMFRGGRLYVVGGYPTESQGQFGRSAEVFDFATWQWSTLEGFLDCATCLLTLVDDYGDGDERIYICSDGGLMTTIKDFAGQKIATLPPEIRHVAHIKAFDGAILVIGSSGYGEEHMSFVFDVKSDNGWRKLDNPRGFRGHVQTSWVFKI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0449 360 SMART kelc_smart 119 168 IPR006652 GO:0005515
Lan2g0449 360 SMART kelc_smart 170 217 IPR006652 GO:0005515
Lan2g0449 360 SMART kelc_smart 218 265 IPR006652 GO:0005515
Lan2g0449 360 Pfam Kelch motif 168 203 IPR006652 GO:0005515
Lan2g0449 360 Pfam Kelch motif 114 154 IPR006652 GO:0005515
Lan2g0449 360 PANTHER OS02G0208700 PROTEIN 1 357 IPR044595 GO:0080037|GO:2000762
Lan2g0449 360 SUPERFAMILY Kelch motif 81 343 IPR015915 GO:0005515
Lan2g0449 360 Gene3D - 11 290 IPR015915 GO:0005515
Lan2g0449 360 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 357 - -
Lan2g0449 360 SUPERFAMILY F-box domain 1 56 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0449 Lan-Chr2 4877103 4878505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0449 5 197 Miscellaneous Gene Families AT4G33900 25.481 7.83e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0449 - - gmx:100796602 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0566 5 11329645 11331059 Lan2g0449 2 4877103 4878505 LSH
Lan10g0230 10 1467568 1469204 Lan2g0449 2 4877103 4878505 PCT
Lan2g0449 2 4877103 4878505 Lan10g0230 10 1467568 1469204 PCT