Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1983 ATGTCGTCACCAACGCAGAAGAACATAAAGCAAAAGGTTCTCACGTGCCTTACCAAGCTCTCCGACCGTGACACTCACTCTCTCGCCGTCGCAGAACTCGAATCAATCGCCCGGAACCTCGACCGGACCACGCTTTCGGCATTCCTTTCATGCATAATCTCCACCGATTCCTCCGACAAATCGCTAGTTCGCAAGCAATGTGTGATCCTGTTAGGGTTTCTTGCCGAAACGCACGGTAACGCGCTCTCTCCTTACCTCTCCAAAATCCTCACCGCCGTAATTCGCCGCCTCCGCGACAAGGACTCGTCGGTCCGAACCGCATGCATCAATTCAGTTTCTGCATTGTCGCGTCACGTCACCAAGCAACATTTCTCCACGTTCCTGAAACCGTTAACAGATGCGCTGTTCACGGAACAGGATCAGAATTCGCAGATTGGCACGGCTCTTTGTTTAGCTTCAGCTATTGACGGAGCTCCGGATCCGGACCTGGTTATATTGGCGAAGCTGTTGCCAAGGTTCGAGAAATTTCTGAAGCGCGACGCGTTTAAGGCGAAGTCGGCGGTTATGACGCTGATCGGAAGCGTCGTTGATGTCGGTGGCGCGTCGAATCACACAATTTTGAAGAGGTTGATTCCTTGCTTGGTGGAGTCATTGAGCAGCGGCGATTGGGCGACTAGGAAAGCTGCTGCAGAAGCGTTGGCGGGGATAGCAAACATGGAGGGGAACAACTTGTCGGAATTCAAGGCTGAATGCTTGAAAGTTTTCGAGAATCGACGATTCGATAAGGTAAAGGTAGTTCGAGAAGTTATGAATCAAATGTTGGAAGCGTGGAAGCAGATTCCTGATGTATCGGATGAATTTTCGCCACCTCCTCAATCACAATCTTCTTCAGAAGACAATGCGAATGACGAGCGCAATCCCCTGGACTGTCAAAATTCATGTAATCCTTGTTCAGTAACGGCGAAATTACGGAAGAAGTCCACTCCTGTTAGAAGATTCAGTCTACCTGATTGCTCTTCTGCTAGCAATGTTAAGAATACAAGTGCTTTAAGTACTAACAAGAGAATGAGTTTAGATGTTCCACGAAAATTAAACTCAAAGAATTGGGATGTTCAAATTGCTGTTTCTAATGATCCCTCTGCAGCCATGGCTGATCTTGGGGATCTTCAAGAGACAAATGGATCTCTTTTAGAAAGAAGCAAAAAGAATAAAAGCAGACTTTCAAAGCCAGAAATGAGACATGCTCTATTCAATAAAAATCCCGACGACAAAATACAGAAGTCTGGTGGGTCCAAAACTGGATCTCGTGTGGTTCCATATCATGAAGAGAGTCAAAACTCAGTCCCTGTTAGTAACGTCAGTAAAGATCTCATACAGAATGACAAAGAGAGTGATAATTTATCTTCGATCCGCAACCAGTTACATCAAATTGAGAAGCAGCAGTCAAGTCTACTTGATCTTCTGCAGAAATTTATGGGAAGCTCACAATGTGGAATGCAGTCTTTAGAGACTCGTGTACATGGCCTTGAGTTGGCGTTGGATGAGATCTCTCATGATTTGGCTATATCAAGTGGAAGGATGGCTAATTACGATGTACCTAGCAATGCATGTTGCTTGTTACCTGGAGCAGAACTCTTGAGATCCAGGTTCCGGAGGAAAACACAGGGTCCATATTCATCCTCCCGGTTCTCTAAATCTGGCGGCACCCGGTCACTTGCTGCCATGCACTACAAAGCTGACAGGAATGCTGAAACTAGATTGGCAAACCACAGACTCAGGCTTGATGGCGGCTTCATCACTAATCCGCTGGCAGACATTCATACTAGTGCAATGGATTTTGCAAGACCAGAGCCACTTTAA 1860 0.4645 MSSPTQKNIKQKVLTCLTKLSDRDTHSLAVAELESIARNLDRTTLSAFLSCIISTDSSDKSLVRKQCVILLGFLAETHGNALSPYLSKILTAVIRRLRDKDSSVRTACINSVSALSRHVTKQHFSTFLKPLTDALFTEQDQNSQIGTALCLASAIDGAPDPDLVILAKLLPRFEKFLKRDAFKAKSAVMTLIGSVVDVGGASNHTILKRLIPCLVESLSSGDWATRKAAAEALAGIANMEGNNLSEFKAECLKVFENRRFDKVKVVREVMNQMLEAWKQIPDVSDEFSPPPQSQSSSEDNANDERNPLDCQNSCNPCSVTAKLRKKSTPVRRFSLPDCSSASNVKNTSALSTNKRMSLDVPRKLNSKNWDVQIAVSNDPSAAMADLGDLQETNGSLLERSKKNKSRLSKPEMRHALFNKNPDDKIQKSGGSKTGSRVVPYHEESQNSVPVSNVSKDLIQNDKESDNLSSIRNQLHQIEKQQSSLLDLLQKFMGSSQCGMQSLETRVHGLELALDEISHDLAISSGRMANYDVPSNACCLLPGAELLRSRFRRKTQGPYSSSRFSKSGGTRSLAAMHYKADRNAETRLANHRLRLDGGFITNPLADIHTSAMDFARPEPL* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1983 619 Gene3D - 1 373 IPR011989 -
Lan1g1983 619 ProSiteProfiles HEAT repeat profile. 89 127 IPR021133 -
Lan1g1983 619 Pfam HEAT repeat 210 237 IPR000357 GO:0005515
Lan1g1983 619 SUPERFAMILY ARM repeat 9 277 IPR016024 -
Lan1g1983 619 MobiDBLite consensus disorder prediction 325 345 - -
Lan1g1983 619 MobiDBLite consensus disorder prediction 281 311 - -
Lan1g1983 619 MobiDBLite consensus disorder prediction 392 450 - -
Lan1g1983 619 MobiDBLite consensus disorder prediction 286 311 - -
Lan1g1983 619 MobiDBLite consensus disorder prediction 427 450 - -
Lan1g1983 619 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 6 610 - -
Lan1g1983 619 MobiDBLite consensus disorder prediction 395 421 - -
Lan1g1983 619 ProSiteProfiles HEAT repeat profile. 210 246 IPR021133 -
Lan1g1983 619 Coils Coil 460 480 - -
Lan1g1983 619 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 6 610 IPR033337 GO:0005874|GO:0008017
Lan1g1983 619 SMART TOG_3 32 269 IPR034085 -
Lan1g1983 619 Coils Coil 499 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1983 Lan-Chr1 35004905 35007847 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1983 - - gmx:100789197 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0859 12 15658902 15662773 Lan1g1983 1 35004905 35007847 LSH
Lan1g1391 1 23634215 23637197 Lan1g1983 1 35004905 35007847 LSH