Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1391 ATGTCATCATCTCATCAGAAGAATATAAAGCAAAAGGTCTTCACCTGCCTCACCAAGCTCTCCGACCGCGACACTCACTCCCTCGCCGTCGCCGAACTAGAATCCATCGCCCGGAATATCGACCCAACCACCGTGCCGGTGTTCCTCTCTTGCATTCTCTCAACCGATTCCTCCGACAAATCTCCAGTTCGCAAGCAATGCGTGAACCTCTTAGGGCTTATCTCCGAAACGCACGGCAACGCGCTCTCTCCCTACCTCTCCAAAATCCTCACCGCCGTCGTACGCCGTCTCCGCGACCCGGACTCGTCGGTGCGATCCGCATGCGTCAATTCCGTTTCCGCATTGTCACGCCACGTCACCAAGCAACCATTCTCCACTTTCCTGAAACCGTTAACGGAAGCTCTGTTCACGGAGCAGGATCAGAACTCGCAGATTGGAGCCGCGCTTTGTTTAGCTTCGGCGGTTGATGGAGCTCCGGATCCTGAACCGGTTAGGTCGGCGAAGCTGTTGCTGAGGTTGGAGAAATTGCTGAAGCGCGATACGTTTAAGGCGAAGCCAGCGGTGATGACGCTGATCAGAAGCGTCGTCGAGGCCGGTGGCGCGTCGAATCACGCAATTCTGAGCAGTTTGGTTCCATGCTTGGTGGAATCGTTGAGAAGCGGCGATTGGACGGCGAGGAAAGCTGCGGCAGAGGCCTTGGTGGTGATTGCGAACGTGGAGAGGGACTACTTGTCGGAAATGAAGGCCGAGTGTTTAAAAGTTTTCGAGAATCAACGATTTGATAAGGTAAAGGTTGTTCGGGAAGTTATGAATCAGATGGTGGAAGCGTGGAAGCATATTCCTGATGTATCGAATGAATTTTCGCCACCTCCTCAATCACAATCTTCTTCAAAAGATAATGCAAGTGATGGGCGCTATCCCCCAAGCCATCAAAATACAAGTAACCCTCGTTCAGCAATGGCAAATTTTCGGAAGAAATCCTCTCCTGTTAGCAGATTTAGTCTACCAGACAGTTCATCTGCTAGCAATGCTAAGAATGCAAGTTCTTTAAGTAGTAACAAGAGAATGAGTTTGGGTGTTTCACGAAAATTAAATCATAAGAATTGGGATGTTCAAGTTGCTGTGCCTAATGCTCCCTCTGCAACCATGGCAGATCATGGTGATCTTCAGGAGGTGGATGAAACTGTTTTGGAAAGAAGCAAAAAGGAGAAAAGCAGATTTTTAAAGCCAGAAATGAGACGTGCTCTATTCAATAAAACTTCTGATGACAAAATACAGAAGTTCGGAGGGTCCAAAGCTGGATCTCGTGTGGTTCCATATCATGAAGAGAGTCAAGACTCATTTCCTGTCAGAAATGTCACTAAAGATCTTGTGAAAAATGACAAAGATAGTGAAGAGTTATCTTTGATCCATAACCAGTTAGAACAAATTGAGAAGCAGCAGTCGAGTCTACTTGATCTTCTGCAGAAATTTATGGGAAGCTCACAAAGTGGAATGCATTCTTTGGAGACTCGTGTACGTGGCCTTGAGTTGGCATTGGATGAGATCTCGTATGATTTGGCTATATCAAGTGGAAGGATGACTAATTATGATGCTCCTGGTAATGCATGTTGCTTGCTACCTGGAGCAGAATTTTTGAGCTCCAGATTTTGGAGGAAAACACAGGGTCGATATACATCCTCCCGGTTTTCTAAATCTGGTGGCCCCCCATCACTTGCTGCCATGCATTACAACACTGACAGGAATGCTGAAACTAGGTTGCCAAACCAGGGACTCAGGCCTGATGGAGGCTTCATCACTAATCCGCTGGCAGAGGTTCGCACTAATTCAAGGGATTTTGCACAATCAAATCCAGTTTAA 1860 0.4737 MSSSHQKNIKQKVFTCLTKLSDRDTHSLAVAELESIARNIDPTTVPVFLSCILSTDSSDKSPVRKQCVNLLGLISETHGNALSPYLSKILTAVVRRLRDPDSSVRSACVNSVSALSRHVTKQPFSTFLKPLTEALFTEQDQNSQIGAALCLASAVDGAPDPEPVRSAKLLLRLEKLLKRDTFKAKPAVMTLIRSVVEAGGASNHAILSSLVPCLVESLRSGDWTARKAAAEALVVIANVERDYLSEMKAECLKVFENQRFDKVKVVREVMNQMVEAWKHIPDVSNEFSPPPQSQSSSKDNASDGRYPPSHQNTSNPRSAMANFRKKSSPVSRFSLPDSSSASNAKNASSLSSNKRMSLGVSRKLNHKNWDVQVAVPNAPSATMADHGDLQEVDETVLERSKKEKSRFLKPEMRRALFNKTSDDKIQKFGGSKAGSRVVPYHEESQDSFPVRNVTKDLVKNDKDSEELSLIHNQLEQIEKQQSSLLDLLQKFMGSSQSGMHSLETRVRGLELALDEISYDLAISSGRMTNYDAPGNACCLLPGAEFLSSRFWRKTQGRYTSSRFSKSGGPPSLAAMHYNTDRNAETRLPNQGLRPDGGFITNPLAEVRTNSRDFAQSNPV* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1391 619 SUPERFAMILY ARM repeat 7 272 IPR016024 -
Lan1g1391 619 Pfam HEAT repeat 210 238 IPR000357 GO:0005515
Lan1g1391 619 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 5 614 - -
Lan1g1391 619 MobiDBLite consensus disorder prediction 286 357 - -
Lan1g1391 619 ProSiteProfiles HEAT repeat profile. 89 127 IPR021133 -
Lan1g1391 619 Gene3D - 1 398 IPR011989 -
Lan1g1391 619 MobiDBLite consensus disorder prediction 282 357 - -
Lan1g1391 619 Coils Coil 460 480 - -
Lan1g1391 619 SMART TOG_3 32 269 IPR034085 -
Lan1g1391 619 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 614 IPR033337 GO:0005874|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1391 Lan-Chr1 23634215 23637197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1391 - - gmx:100789197 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1391 1 23634215 23637197 Lan1g1391 1 23634215 23637197 ECH
Lan12g0859 12 15658902 15662773 Lan1g1391 1 23634215 23637197 LSH
Lan1g1391 1 23634215 23637197 Lan1g1983 1 35004905 35007847 LSH