Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0859 ATGTCGTCACCGCAGCAGAAGAACATAAAGAAAAAGGTTTTTACGTGCCTCACCAAACTCTCCGACCGTGATACTCACTCCCTCGCCGTCGCTGAACTCGAATCCATCGCCCGAAATCTTAACCAGACCACCGTGCCTTCGTTTCTATCCTGTATACTCTCCACCGATTCTTCCGACAAATCCTTAGTTCGCAAGCAATGCGTGAACCTGTTAGGGTTTCTCGCCGAAACTCACGGCAACATGCTCTCTCCTCACCTCTCAAAAATTCTCAACGCCGTCGTCCGCCGCCTTCGCGACCCTGACTCTTCGGTCCGATCTGCATGTGTCAATTCCGTTTCGGCGTTGTCACGCTACGTCACCAAACAACCGTTCTCCACGTTCCTGAAACCATTATCGGAGGCTCTGTTCACGGAGCAGGATCAGAACTCGCAGCTTGGAGCGGCGCTTTGTTTTGCTTCGGCTATTGATGGAGCTCCAGCCCCGGAACCGGCTAAACTGGCGAAGCTTTTGCCGAGGCTCGAAAAATTGCTTAAGCGCGATGCGTTTAAGGCGAAGCCGGCGGTGATAACGCTGATCGGAAGCATTGTTGAGGCCGGTGGCGCGTCTAATCACGCAATTTTGAAGAATTTGGTTCCTTGCTTGGTGGAGTCGTTGAGCAGCAGCGATTGGGCGGCAAGGAAGGCTGCTGCGGAGGCATTGGTGGTGATGGCGAACGTGGAGAGGGGCTTCTTGTCGGAATACAAGGCTGGATGCTTGAAAGTTTTCGAGAATAGACGATTTGATAAGGTAAAGGTAGTTCGGGAAGTTATGAATCAGATGTTGGAAGCATGGAAGCAGATTCCTGATGTATCGGATGAATTTTCTCCACCTCCTCGATCGCAATCTTCTTCAAAAGGGAATTCAAGTGAACACTATCAAAATTCATGTAATCCTCGTTCATTAGTGGTGAATTTGCAGAAGAAATCCACTCCTGTTAGCAGATTCAGTCTACCAGATTGTTCATCTGCTGGCAATGCTAAGAACACAAGTGCATTAAGTAGTAACAAGAGAGTGAGTTCGGGTGTTTTGCGAAAATTGAACCATAAGAATTGGGATGTTCAAGTTTCTGTCTCTAATGATCCCTCTGCAGCCACGGCTGACCATGGGGATCTTCAAGAGACAGATGGAACTGTTTTGGAAAGAAGCAAAAAGGATAAAAGCAGACTTTTAAAGCCAGAAATGAGACGTGCTCTATTCAATAAAAATCCTGATGACAAAACAGAGAAGTTTGGTGAGTACAAAGCTGGATCTCGTGTCGTTCCATGTCACGAAGAGTGTCAAAACTCAGTTCCTGTCAGTGATGTCAGTAAAGATATCATAAAGAATGAGAAAGAGACTGAAGATTTATATTTGATCCGCAACCAGTTACATCAAATTGAGAAGCAGCAGTCGAGTCTACTTGATCTTGTACAGAAATTTATAGGAAGCTCGCAAAGTGGCATGCACTCTTTAGAGACTCGTGTACACGGCCTTGAGTTGGTGTTGGATGAGATTTCTTATGATTTGGCTATATCAAGAGGAAGCATGACTAATTATGATGAGCCTGGTAATGCATGTTGCTTGCTACCTGGAGCAGAATTTTTGAGCTCCAGATTTTGGAGGAAAGCACAGGGTCGATATTCGTTCCCCCGGTTCTCTAAATCTGGCAGCACCCCCTCACTTTCAGTTGCTGACACGCACTACAGGAATGTTGAAACTAGGTTGATGAATCGCAGACTCAGGCCAGATGGAGGCTTCATCATTAATCCGCTTGCAGAGGTTCGTACTAATGCAAGGGATTTTGCAAGAGGGGAGCTAGTTTAA 1842 0.4658 MSSPQQKNIKKKVFTCLTKLSDRDTHSLAVAELESIARNLNQTTVPSFLSCILSTDSSDKSLVRKQCVNLLGFLAETHGNMLSPHLSKILNAVVRRLRDPDSSVRSACVNSVSALSRYVTKQPFSTFLKPLSEALFTEQDQNSQLGAALCFASAIDGAPAPEPAKLAKLLPRLEKLLKRDAFKAKPAVITLIGSIVEAGGASNHAILKNLVPCLVESLSSSDWAARKAAAEALVVMANVERGFLSEYKAGCLKVFENRRFDKVKVVREVMNQMLEAWKQIPDVSDEFSPPPRSQSSSKGNSSEHYQNSCNPRSLVVNLQKKSTPVSRFSLPDCSSAGNAKNTSALSSNKRVSSGVLRKLNHKNWDVQVSVSNDPSAATADHGDLQETDGTVLERSKKDKSRLLKPEMRRALFNKNPDDKTEKFGEYKAGSRVVPCHEECQNSVPVSDVSKDIIKNEKETEDLYLIRNQLHQIEKQQSSLLDLVQKFIGSSQSGMHSLETRVHGLELVLDEISYDLAISRGSMTNYDEPGNACCLLPGAEFLSSRFWRKAQGRYSFPRFSKSGSTPSLSVADTHYRNVETRLMNRRLRPDGGFIINPLAEVRTNARDFARGELV* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0859 613 MobiDBLite consensus disorder prediction 288 308 - -
Lan12g0859 613 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 6 606 - -
Lan12g0859 613 SUPERFAMILY ARM repeat 9 277 IPR016024 -
Lan12g0859 613 Gene3D - 1 372 IPR011989 -
Lan12g0859 613 MobiDBLite consensus disorder prediction 325 351 - -
Lan12g0859 613 Pfam HEAT repeat associated with sister chromatid cohesion 87 110 IPR026003 -
Lan12g0859 613 Pfam HEAT repeat 210 238 IPR000357 GO:0005515
Lan12g0859 613 ProSiteProfiles HEAT repeat profile. 89 127 IPR021133 -
Lan12g0859 613 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 6 606 IPR033337 GO:0005874|GO:0008017
Lan12g0859 613 MobiDBLite consensus disorder prediction 282 308 - -
Lan12g0859 613 SMART TOG_3 39 269 IPR034085 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0859 Lan-Chr12 15658902 15662773 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0859 - - gmx:100789197 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0859 12 15658902 15662773 Lan1g1391 1 23634215 23637197 LSH
Lan12g0859 12 15658902 15662773 Lan1g1983 1 35004905 35007847 LSH