Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1605 ATGGGAGTTGGAGGCACTTTTGAGTACTTATCTGATCTAGTGGGAAGTAACCATCACCACAAGAAGAGAAAGCAATTAAACACAGTAGAACTGAAGGTAAGAATGGACTGTGATGGTTGTGAGATGAAGGTAAAGAAAACCCTCTCTTCACTAAGTGGAGTAAAATCTGTGGAGATAAACCGTAAGCAGCAAAAAGTGACAGTAACTGGGTATGTTGAACCAAACAAGGTGCTAAAGAAGGCCAAATCAACAGGGAAGAAGGCTGAGATTTGGCCTTATGTGCCTTACAATTTGGTGGCTCAGCCATATGCTGCTACATCTTATGACAAGAAGGCTCCTCCTGGTTATGTGAGAAAAGTGGAGAACACTGTTGCAACTGGAACAGTGACAAAATCATATGAAGACCCTTATATCAACATTTTCAGTGATGACAACCCAAATGCTTGTTTCATCATGTAG 459 0.4118 MGVGGTFEYLSDLVGSNHHHKKRKQLNTVELKVRMDCDGCEMKVKKTLSSLSGVKSVEINRKQQKVTVTGYVEPNKVLKKAKSTGKKAEIWPYVPYNLVAQPYAATSYDKKAPPGYVRKVENTVATGTVTKSYEDPYINIFSDDNPNACFIM* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1605 152 SUPERFAMILY HMA, heavy metal-associated domain 28 92 IPR036163 GO:0046872
Lan1g1605 152 Gene3D - 23 90 - -
Lan1g1605 152 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 3 152 IPR045181 GO:0046872
Lan1g1605 152 CDD HMA 30 89 IPR006121 GO:0046872
Lan1g1605 152 ProSiteProfiles Heavy-metal-associated domain profile. 35 90 IPR006121 GO:0046872
Lan1g1605 152 PANTHER - 3 152 - -
Lan1g1605 152 Pfam Heavy-metal-associated domain 32 87 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1605 Lan-Chr1 27421616 27422879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1605 - - fve:101300069 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0642 12 13246884 13248061 Lan1g1605 1 27421616 27422879 LSH
Lan1g1605 1 27421616 27422879 Lan14g0179 14 2165422 2166492 PCT