Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0179 ATGGGAGTTGGAGGCACTATAGAATACTTATCTGATTTAATAGGGAGTGGCCATAACCACCATCACAAGAAGAAGAAGAAGAAGCAATTGCAGATTGTAGAACTGAAGATTAGAATGGATTGTGATGGTTGTGAACTTAAGGTTAAGAAAACCCTATCTTCATTAGATGGAGTAAAATCAGTGGAGATAAACAGAAAACAGCAGAAAGTGACAGTAACAGGTTATATAGAACCAAACAAGGTGCTAAAGAAAGCAAAATCAACAGGGAAAAAAGCAGAAATATGGCCATATGTTCCATATAACATGGTGGCTTATCCATATTCTGCTTCATCTTATGATAAAAAGGCTCCTCCTGGGTATGTTAGAAGGGTTGAATACAGTTCCAATAATGTTGGAACCATGACATCATATGAAGAATCTTATGTTATGAACATGTTCAGTGATGAAAACCCAAATGCTTGTTCTATCATGTAG 474 0.3629 MGVGGTIEYLSDLIGSGHNHHHKKKKKKQLQIVELKIRMDCDGCELKVKKTLSSLDGVKSVEINRKQQKVTVTGYIEPNKVLKKAKSTGKKAEIWPYVPYNMVAYPYSASSYDKKAPPGYVRRVEYSSNNVGTMTSYEESYVMNMFSDENPNACSIM* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0179 157 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 4 157 - -
Lan14g0179 157 Gene3D - 17 96 - -
Lan14g0179 157 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 157 IPR045181 GO:0046872
Lan14g0179 157 CDD HMA 34 93 IPR006121 GO:0046872
Lan14g0179 157 Pfam Heavy-metal-associated domain 37 91 IPR006121 GO:0046872
Lan14g0179 157 ProSiteProfiles Heavy-metal-associated domain profile. 39 94 IPR006121 GO:0046872
Lan14g0179 157 SUPERFAMILY HMA, heavy metal-associated domain 31 96 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0179 Lan-Chr14 2165422 2166492 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0179 - - aprc:113872880 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0642 12 13246884 13248061 Lan14g0179 14 2165422 2166492 PCT
Lan1g1605 1 27421616 27422879 Lan14g0179 14 2165422 2166492 PCT