Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0642 ATGGGAGTTGGAGGCACTCTTGAGTATTTGTCTGATCTAATGGGAAGTGGGCATCACCACAAGCAGAAGAGAAAACAGTTAAACACAGTAGAGCTTAAGATAAGGATGGACTGTGATGGTTGTGAAATGAAGGTCAAGAAAACCCTCTCTTCACTTAGTGGAGTAAAATCTGTAGAGATAAACAGGAAACAGCAGAAAGTGACAGTAACTGGGTATGTTGAACCAAACAAGGTGCTGAAGAAGGCTAAGTCAACAGGGAAAAAGGCTGAGATTTGGCCTTATGTGCCTTACAATTTGGTGGCTCAGCCATATGCTGCAACATCTTATGATAAGAAGGCTCCTCCTGGTTATGTGAGGAGAGTTGAAAACACTGCTGCAACTGGAACAGTGACAAGATCTTATGAAGACCCTTATATCAACATGTTCAGTGATGACAATCCAAATGCTTGTTCTATCATGTAG 462 0.4177 MGVGGTLEYLSDLMGSGHHHKQKRKQLNTVELKIRMDCDGCEMKVKKTLSSLSGVKSVEINRKQQKVTVTGYVEPNKVLKKAKSTGKKAEIWPYVPYNLVAQPYAATSYDKKAPPGYVRRVENTAATGTVTRSYEDPYINMFSDDNPNACSIM* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0642 153 PANTHER - 3 153 - -
Lan12g0642 153 ProSiteProfiles Heavy-metal-associated domain profile. 36 91 IPR006121 GO:0046872
Lan12g0642 153 SUPERFAMILY HMA, heavy metal-associated domain 29 93 IPR036163 GO:0046872
Lan12g0642 153 Pfam Heavy-metal-associated domain 34 88 IPR006121 GO:0046872
Lan12g0642 153 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 3 153 IPR045181 GO:0046872
Lan12g0642 153 Gene3D - 24 91 - -
Lan12g0642 153 CDD HMA 31 90 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0642 Lan-Chr12 13246884 13248061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0642 - - aprc:113872880 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0642 12 13246884 13248061 Lan1g1605 1 27421616 27422879 LSH
Lan12g0642 12 13246884 13248061 Lan14g0179 14 2165422 2166492 PCT