Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0709 ATGTCAATGAGTCAACCAGGTTCAGACCAAGGTGGTGGTGGTGGTGGTGACGCCGTGGCGAAGAAGGAGAGAGAGGAATGCGGTCGGTGGGCCGAGATTGATACATCGGCGCCGTTTGAATCGGTGAAAGAAGCCGTCACACGATTCGGCGGTGTTGGTTACTGGAAACCCATTCCCAACAATAACAATAATAATAACAAGTTCGTGTTTGTTGAGCTGCCCCACACGGAAGAGCTTGACGCTGGAAAACTGGAGGAGCAAGCAGCAGTACTTGAGAAAGAACTGATCCTGAAAGAAAGGGAAACTCTTGATGTCTTAAAAGAGTTAGAAAGTACTAAAAGGCTTGTGGAAGATTTGAAATCAAAGGTGCAGAAGGAAGAAGCAGAAATGAATTTGAATCTTGAGATGAGTGTATGTGATAATATATCTTCTGTGGAGGAGAAAGAAGATAAGGAAAACCAAGTATGTCATGTTCTTCAGCATCCAACGGAAGATTGTAGCCGATACCCTTCACCAAGTCCAGGGTTAATACTAATGGAACTGAAGCAGGCGAAATTTAATCTGAACAGAACTACAAATGATATTTCGGACGTCCGAGTTTCTGTTGAATCACTTAATAAGAAGTTAGAAAAGGAAAGGATCTCTCTTGAGAAAACCCGAGAGAGGTTAACCCAGAATTCTTCAAAAATATCTTCTCTCGAGGAAGAGTTAAACCAGACTAGACTAAAACTGCATATGGCAAAAGATGCTGAAATTAAAGGTGGTTTAGACGATCCTTCAGATATTACAAGAGAGCTCCAGTGGTTGAGTTCCGAGGCAGATCATTTCGGAAAAATGGGAGAAGTTGCGAAATCAGAAATATTGAGAGCAGTGTCTGAGATTGATCAGACAAAAGCTATGATAAGCACAGCTGAAATCAGGTTGGTTGCTGCAAGAAAAATGAAGGAAGCTGCTAGAGCAGCAGAAGCTTCTGCCCTTGCAGAAATCAAAGCTTTATCTCATCATGAGAGTTCGACCAGAGATTGTATGCAAAATCATGAAGCTGTCACTATTTCCTTCGAAGAGTATACTTCCCTGACAAGCAAAGCCCGGGCTGCAGAGGAACATTCTAAGAAGAGAGTTTTAAATGCTATGTATCAAGTTGATGAAGCAAATTTATCCAAAATGGACATCTTGAAAAAGGTAGAGGAAGCAACAGAAGAAGTTAAAACTAGCAAGATGGCCCTGGAAGAAGCTCTAGAAAGGGTGGAGGCTGCAAATAGAGGAAAGCTAGTGGTTGAAGAAGCTTTAAGAAAGTGGCGCTCTGACGGATACAAAAGGCGTTCTTCTATACATAATGCTACCAAGTTTAAAAATTCTTATCAATCTCAGCATCGGAGAGATTCTCAGTTATTTGATGTGAATGGGCTGAACCTGGCAAATGATGAAGCCAAGCCAGTTCTCAAGTCGACCTTATCAATAGGGCAAATATTGAGCAGGAAGCTGATGCTGCCAGAAGAGTTTGAAGGCAAGATACATAGGGAAAGAAGCTCGGTGAAACGGAAGGTTTCATTGGGGCAGATGCTTGGCAAGCAAAATGATGATCCATCCTTTGACAGGCAAGTTGAGAAAGAGAATAGTCAGAAGCAGTTTTCTGCAAAGAGGAAGAAATTCGGATTTGCTCGGTTCTCCCTTCTTCTGAAGAAACAACAAAAGAAGAAGAAGGCAACGCTGAACTTGAGATGA 1725 0.422 MSMSQPGSDQGGGGGGDAVAKKEREECGRWAEIDTSAPFESVKEAVTRFGGVGYWKPIPNNNNNNNKFVFVELPHTEELDAGKLEEQAAVLEKELILKERETLDVLKELESTKRLVEDLKSKVQKEEAEMNLNLEMSVCDNISSVEEKEDKENQVCHVLQHPTEDCSRYPSPSPGLILMELKQAKFNLNRTTNDISDVRVSVESLNKKLEKERISLEKTRERLTQNSSKISSLEEELNQTRLKLHMAKDAEIKGGLDDPSDITRELQWLSSEADHFGKMGEVAKSEILRAVSEIDQTKAMISTAEIRLVAARKMKEAARAAEASALAEIKALSHHESSTRDCMQNHEAVTISFEEYTSLTSKARAAEEHSKKRVLNAMYQVDEANLSKMDILKKVEEATEEVKTSKMALEEALERVEAANRGKLVVEEALRKWRSDGYKRRSSIHNATKFKNSYQSQHRRDSQLFDVNGLNLANDEAKPVLKSTLSIGQILSRKLMLPEEFEGKIHRERSSVKRKVSLGQMLGKQNDDPSFDRQVEKENSQKQFSAKRKKFGFARFSLLLKKQQKKKKATLNLR* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0709 574 Pfam Weak chloroplast movement under blue light 32 130 IPR008545 -
Lan1g0709 574 Pfam Weak chloroplast movement under blue light 178 439 IPR008545 -
Lan1g0709 574 Coils Coil 81 101 - -
Lan1g0709 574 MobiDBLite consensus disorder prediction 1 25 - -
Lan1g0709 574 MobiDBLite consensus disorder prediction 520 546 - -
Lan1g0709 574 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 24 568 - -
Lan1g0709 574 Coils Coil 381 419 - -
Lan1g0709 574 PANTHER MYOSIN HEAVY CHAIN-LIKE 24 568 - -
Lan1g0709 574 MobiDBLite consensus disorder prediction 529 545 - -
Lan1g0709 574 Coils Coil 199 250 - -
Lan1g0709 574 Coils Coil 106 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0709 Lan-Chr1 15969286 15971960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0709 - - gmx:100783770 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0186 12 3047904 3051408 Lan1g0709 1 15969286 15971960 LSH
Lan11g1658 11 32297643 32314296 Lan1g0709 1 15969286 15971960 PCT
Lan13g1191 13 17532799 17535179 Lan1g0709 1 15969286 15971960 PCT
Lan1g0709 1 15969286 15971960 Lan11g1658 11 32297643 32314296 PCT
Lan1g0709 1 15969286 15971960 Lan13g1191 13 17532799 17535179 PCT