Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g1191 ATGGAGTCTAATATTTCTGCACCCTTTAACTCAGTGAAAGAAGCAGCTACTCGTTACATGAACTTCATTACACCTTCGGTATACATAGAAGAGTATGATCCGAAAAAATTGGAGGAGCAGGCTGCAACATTGAAGAAAGAATTGATCCTGAAAGAAAGGGAAACTGTTGATGTGTTACAAGAATTGGATAGTACTGGAAGGATTGTCGAAGACTTGAAATCAAGACTAAAGGAGGAAGAATCGAAGGTGAAAATTGTATCCGATCGTGAAGAGAATGAAAGCCAGGTGACTCGGTTGAATGTTCTTAAACCTTTGAGAGATGATTTTGTTTTTTATCCTTCATCTAATCCAGGCAAAGTATTAATGGAACTGAAGCAGGCGAAATTGAATCTGATCAAACTTTCCTATGATGTTGCTGGTAGACGAGCTTTTGTCGAATCACTTAAGAAGAAGTTAAAGAAGGAAAGAATCGAGCTTGAGAAAACCCGCGAAAGGTTAACTCTAAATTGTTGGAAAAAATCTTCTCTCAAGGAAGAGCTAAACCGGATCAGACTAAGACTTCATGTAGCAAAAGGTTCTGAAATCAAATATGCTTTAGATGATCCTTTCGATTTCACAAGAGAGATGCAGAGAATGATTGCTAAGTCAGAGCATTTTAGAAAAATTGGAGAAGCTGCAAGATCAGAACTCTTTAGGACAATGTCGGAGATCGAGGAAACAAAAATGTCGATAAGAACTTCTGAAATATGGTTAGATGCTGCCAGAAAAATGAAGGAAGCTTCAAATGCAGCAGAAGCTGTTGCTCTATCAGAAATTAATGCTTTATCTAATCAAAATCATGAAGAGATCACTCTTTCTATTGAAGAATATACTGCTCTGACCCGAAAGGCTCGAGATGCTGAAGAACAATCTAAGAAGAGAGTTGTAGATGCTATGCTTGAAGTCGATCGAGCAATGCTTTCAAAAATACGGATTTCGAAAAGGGAGGAGGAAGCTACTGAAGATGTTAAAACCAATAAAAAGGCTCTTGAAGAAGCTCTTGAAAGGGTAGAGGCTGCAAATAGAGAGAAAGTAGCAGTTGAAGAGGCCTTAAGGAAGTTGAAATTTGATGGTCATAAAAGTCGTTCGTCTAGACATAACCGTGCCAAGTTCAAGAATTCATCTTCCCGTCGGAGAGATTCGCGATTACTTGATGTAAATGGATTGGATTTGGTAAATGAAGAAACCAAACTGGTTTCAAAGCCATCTCAATCAATAGGACAAATACTGAGAGGAGAGTTGCTTGCGCCACAAGAAATCGAAGTTGGTATGCCCAAGGAAAGAAATTCAGTGCAATTGGGTCAGATTATTTGCAAAAAAGATGATGATCCATCCTTTGACATAAAACTTGATGCAGAAAATTGCAAGAAGCAGATTTCTTCAAAGAGAAAGAATTTCGGAATTGCGAAAACTGCACTTTTTTTGATAAAAAGGCTAAAGAAGAAGAATCAACCAACACTGAAGAGGCAACCAACACTAAAATCTTGGCTTCAATAG 1536 0.3802 MESNISAPFNSVKEAATRYMNFITPSVYIEEYDPKKLEEQAATLKKELILKERETVDVLQELDSTGRIVEDLKSRLKEEESKVKIVSDREENESQVTRLNVLKPLRDDFVFYPSSNPGKVLMELKQAKLNLIKLSYDVAGRRAFVESLKKKLKKERIELEKTRERLTLNCWKKSSLKEELNRIRLRLHVAKGSEIKYALDDPFDFTREMQRMIAKSEHFRKIGEAARSELFRTMSEIEETKMSIRTSEIWLDAARKMKEASNAAEAVALSEINALSNQNHEEITLSIEEYTALTRKARDAEEQSKKRVVDAMLEVDRAMLSKIRISKREEEATEDVKTNKKALEEALERVEAANREKVAVEEALRKLKFDGHKSRSSRHNRAKFKNSSSRRRDSRLLDVNGLDLVNEETKLVSKPSQSIGQILRGELLAPQEIEVGMPKERNSVQLGQIICKKDDDPSFDIKLDAENCKKQISSKRKNFGIAKTALFLIKRLKKKNQPTLKRQPTLKSWLQ* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g1191 511 Pfam Weak chloroplast movement under blue light 122 371 IPR008545 -
Lan13g1191 511 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 6 497 - -
Lan13g1191 511 Coils Coil 62 89 - -
Lan13g1191 511 MobiDBLite consensus disorder prediction 370 392 - -
Lan13g1191 511 Coils Coil 326 370 - -
Lan13g1191 511 MobiDBLite consensus disorder prediction 371 386 - -
Lan13g1191 511 Coils Coil 142 169 - -
Lan13g1191 511 PANTHER MYOSIN HEAVY CHAIN-LIKE 6 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g1191 Lan-Chr13 17532799 17535179 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g1191 - - gmx:100785049 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1658 11 32297643 32314296 Lan13g1191 13 17532799 17535179 LSH
Lan13g1191 13 17532799 17535179 Lan12g0186 12 3047904 3051408 PCT
Lan13g1191 13 17532799 17535179 Lan1g0709 1 15969286 15971960 PCT
Lan12g0186 12 3047904 3051408 Lan13g1191 13 17532799 17535179 PCT
Lan1g0709 1 15969286 15971960 Lan13g1191 13 17532799 17535179 PCT