Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0186 ATGGAAGTTAATGCTGCGATCTCCGACATGTCAGTGAACCGGTTCGAACCGGGTTCAGGTAACGTTGTTGGTGACGGCGTGGCGAAGAAGGAGAAAGAAGAGTGTGGTCTGAGAACTGAGATTGATACATCAGTGCCGTTTGAATCTGTGAAGGAAGCCGTCACACGATTCGGTGGTCTTGGTTACTGGAAACCCATTTCCAACAACAATAACAAGAAGCTCGTCTTTGCTGAGCTGCAGCGCACGGAAGAGCTCGACGCTGGAAAACTGGAGGAGGAAGCAGCAGTACTGGAGAAAGAACTGATCCTGAAAGAAAGGGATACTCTTCATGTCTTAAAAGAATTAGAAAGTACTAAAAGGCTTGTGGAAAATTTAAAATCGAAGCTGCAGAAGGAAGAATCCGAAGCTAATTTGAATCATGAGATGAGTGTATGTGATAGCATAGCTTCTGTCAAGGAGAAAGAAGATAAGAAAAACCAAGTGAGTCATGTTCTTCAGCATTCTTCGGAATGTTGTAGCCGATACCCTTCACCGAATCCTGGCTTAATACTAATGGAACTAAAGCAGGCGAAGTTGAACCTGAACAGAACTACAGATGATATTGCTGACGTCCGTGCTTCTGTAGAATCGCTGAACAAGAAGTTAGAAAAGGAAAGGATCTCACTTGAGAAAACCCGTGAGAGGTTAACTAAGAATTCTTCGAAAATATCTTCTCTCGAGGAAGAGCTAAACCAGACTAGACTAAGACTGCAAGTGGCAAAAGATGCTGAAATTAAAGGTGGTTTTGATGATCCTTCAGACATCACAAGAGAGCTCCAGCGATTGATTTCTGAGGCAGATCATTTCAAAAAAATGGGAGAAGTTGCGAAATCAGAAGTGTTGAGAGCAATGTCTGAGATTGAACAAACAAAAGCTATGATAAGCACTGCTGAAATCAGGTTGTTTGCTGCCAGAAAAATGAAGGAAGCTGCTAGAGCAGCAGAAGTTTCTGCCCTTGCAGAAATCAAAGCTTTATCTTATCATGAGAATTCAGGTGGAGATGGTATGCAAAAGCATGAAGGCGTCACTCTTTCCTTCGAAGAGTATACTGCTTTGACATGCAAAGCTCGAGAATCAGAGGAACTTTCTAAAAAGAGAGTTTTCGATGCTATGCTTCAAGTTGATGAAGCAAATTTATCAAAAATGGACATTTTGAAAAGGGTAGAGGATGCAACAAAAGAAGTTAAAACTAGCAAGATGGCCCTTGAAGAAGCTCTGGAAAGGGTGGAGGCTGCAAATACAGGAAAGCTAGCAGTTGAAGAGGCTTTAAGGAAGTGGCGGTCCGACAGCCATAAAAGGCATTCTTCTATACATAACACTAACAAGTTTAAAAATTCTTATCCATCTCCCCATCGGAGAGATTCTCGGTTATTCAATGTAAATGGGCTGAACCTGACAAATGATGAACCTAAGCCAGTTCTGAAGCCAACCCTGTCGATAGGGCAAATTTTGAGCATGAAGCTGATTCCACTAGAAGAATATGAAGGCAAGATGCTTAGAGAAAGAAGCTCGGCGAAACAGAAGGTGTCACTGGGTCAGATGTTTGCCAAACAAAATGATGATCCATCCTTTGACAGGCAAGTTGAGAAAGAAAATACTCAGAAGCAGTTTTCTGCACAAAGGAAGAAATTTGGATTTTCTCGATTCTCCCTTCTTCTGACAAAACAACAAAAGAAGAAGAAGCCAACATTGAACTTAAGATGA 1743 0.4177 MEVNAAISDMSVNRFEPGSGNVVGDGVAKKEKEECGLRTEIDTSVPFESVKEAVTRFGGLGYWKPISNNNNKKLVFAELQRTEELDAGKLEEEAAVLEKELILKERDTLHVLKELESTKRLVENLKSKLQKEESEANLNHEMSVCDSIASVKEKEDKKNQVSHVLQHSSECCSRYPSPNPGLILMELKQAKLNLNRTTDDIADVRASVESLNKKLEKERISLEKTRERLTKNSSKISSLEEELNQTRLRLQVAKDAEIKGGFDDPSDITRELQRLISEADHFKKMGEVAKSEVLRAMSEIEQTKAMISTAEIRLFAARKMKEAARAAEVSALAEIKALSYHENSGGDGMQKHEGVTLSFEEYTALTCKARESEELSKKRVFDAMLQVDEANLSKMDILKRVEDATKEVKTSKMALEEALERVEAANTGKLAVEEALRKWRSDSHKRHSSIHNTNKFKNSYPSPHRRDSRLFNVNGLNLTNDEPKPVLKPTLSIGQILSMKLIPLEEYEGKMLRERSSAKQKVSLGQMFAKQNDDPSFDRQVEKENTQKQFSAQRKKFGFSRFSLLLTKQQKKKKPTLNLR* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0186 580 Pfam Weak chloroplast movement under blue light 39 137 IPR008545 -
Lan12g0186 580 Pfam Weak chloroplast movement under blue light 183 446 IPR008545 -
Lan12g0186 580 Coils Coil 187 256 - -
Lan12g0186 580 Coils Coil 401 421 - -
Lan12g0186 580 MobiDBLite consensus disorder prediction 443 466 - -
Lan12g0186 580 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 30 574 - -
Lan12g0186 580 Coils Coil 80 107 - -
Lan12g0186 580 Gene3D - 183 341 - -
Lan12g0186 580 MobiDBLite consensus disorder prediction 530 554 - -
Lan12g0186 580 PANTHER MYOSIN HEAVY CHAIN-LIKE 30 574 - -
Lan12g0186 580 Coils Coil 112 135 - -
Lan12g0186 580 MobiDBLite consensus disorder prediction 535 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0186 Lan-Chr12 3047904 3051408 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0186 - - gmx:100783770 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0186 12 3047904 3051408 Lan12g0186 12 3047904 3051408 ECH
Lan12g0186 12 3047904 3051408 Lan1g0709 1 15969286 15971960 LSH
Lan11g1658 11 32297643 32314296 Lan12g0186 12 3047904 3051408 PCT
Lan13g1191 13 17532799 17535179 Lan12g0186 12 3047904 3051408 PCT
Lan12g0186 12 3047904 3051408 Lan11g1658 11 32297643 32314296 PCT
Lan12g0186 12 3047904 3051408 Lan13g1191 13 17532799 17535179 PCT