Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0381 ATGTCCATTTCTACCAGAGATTTGGATCCAGCTTTCAAGGGAGCTGGACAAAAGGCGGGACTTGAAATATGGCGAATTGAGAATTTTAATCCGGTTCCCATCCCTCAGTCCTCTTATGGGAAGTTTTTCACCGGGGACTCCTATGTGATATTAAAGACAACTGGTACAAAAAGTGGTGCTCTCCTCCATGATATTCATTACTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGTTGCAGCCATCAAGACAGTTGAGTTGGATGCAGCTCTAGGAGGACGCGCTGTTCAGTATCGTGAAGTACAAGGTCATGAAACTGAAAAGTTTCTGTCTTATTTCAAACCATGTATTATACCTCAAGAAGGTGGAGCTGCCTCTGGTTTTAAACATGTTGAGGCTGAAGAACATAAAACGCGATTGTTCGTATGCAGAGGGAAACATGTTGTAAATGTCAAAGAGGTTCCTTTTGCTCGATCTTCACTCAGCCATGATGATATTTTTATTCTGGATACTGACTCCAAAATCTTCCAATTTAATGGTTCCAATTCATCCATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTACAGTATATTAAGGATACATACCATGATGGGAAATGTGATATAGCCGCTGTTGAGGATGGAAGGTTGATGTCCGATTCTGATACTGGAGAATTCTGGGGTTTCTTTGGAGGCTTTGCTCCTCTTCCACGGAAAACAGTTAATGATGATGATAAGCCTGCTGATTCTCATCCTCCAAAGCTGATGTGTGTTGAAGCGGGGAAGGCAGAACCTATTGAGGCTGATTCATTGACAAGGGAATTACTGGACACAACTAAATGCTATATTATAGATTGTGGGTTGGAATTGTTTGCATGGATGGGAAGAAACTCCTCTCTAGATGAAAGAAAAAGTGCTAGTGGCACTGCAGAGGAGTTAGTCAGTGGCACTGGCCGATCAAAATCCTACATAACTCGTGTGATTGAAGGATTTGAAACTGTGATGTTCAAGTCCAAGTTTGACTCTTGGCCTCAAACAACTAATGTAGCACATGCTGAAGATGGTCGGAGCAAGGTAGCAGAACGTCTAAAACGTCAAGGATTGGACGTCAAGGGTCTCTTGAAAACTGAACCTGAAAAAGAAGAACCTGAAGCCTACATAGATTGCACAGGAAATTTGCGGGTTTGGCGAGTGAATGGTCAGGAAAAGGTTCTTCTTCCAGCCTCTGACCAGTCAAAATTTTATAGTGGGGATTGCTACATCTTTCAGTATTCATATCCTGGAGAAGATAGGGAAGACCATCTTATAGGAACATGGATTGGAAACAATAGTGTTGAGGAAGATAGAGCTTCAGCTCTTTCAATGGCAGGCAAAATGGTTGAATCAATGAAGTTTATTCCTTGCCTGGCTCGTATTTATGAAGGCAGTGAACCAATTCAATTTCAATATATTCTCCAAAGCTTCATTGTCTACAAGGGTGGATTTAGTGATGCATACAAGAATTACATTGTGGAAAAGGAAATACCAGATGAGACATACAATGAGGAGGGCGTTGCATTATTCCGCATCCAAGGCTCTGGACCCGAAAATATGCAAGCTATACAAACTGAATCAGTTGCTTCCTCCTTGAATTCTGCTTACTGCTACATACTACATGATGGGCCTACTGTCTTTTCTTGGTCGGGAAGTTTTACAACTGCAGATGACCAGGAACTTGTGGAGAGAATGTTGGATTTGATAAAGCCGGATTTACAATGCAAACTACAAAAGGAAGGTACAGAATCTGAAAAGTTTTGGGAGATATTAGGAGGAAAAACAGAATATCCCAGTAAAAAGATTGTGAAGGATGCTGAAAATGATCCTCACCTATTTTCTTGCGACTTCTCAAAAGCAGAACTAAAGGTGAAAGAGATATACAACTTTTCCCAGGATGATTTGATGACGGAAGATATTTTCATCTTGGATATTCACTCAGAAATCTTTGTATGGGTTGGCCAGCAGTTTGATCCCAAGAATAGATTGCAGGCTTTAACGATTGGTGAGAAATTTCTTGAGCATGATTTTCTTCAAGAAAAAGTATCTTCTGTAGCTCCAATATATGTTGTCATGGAAGACAGTGAGCCACCTTTCTTCACCCGCTTCTTTAAATGGGAGTCAGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTTACAATTGTGAAAAATGGTGGTACTACACCTTTGGATAAACCGAAACGAAGAGCATCTGTATCTTCAGGGGGAAGGTCTAGTAGCCTTCCTGAAAAATCCCAGCGTTCGCGCAGCGTGTCTGTCAATCCTGATCGTGCTCGTGTTAGAGGAAGATCTCCAGCCTTTACTGCACTAACAGCTAATTTTGAGAATCCTAAAGATAGGAACCTTTCAACTCCACCTCCAATGGTTACAAAACTGTATCCAAAATCTATGTCACCAGATTCAATTAAACAGGCTCCTAAAGCTGCAGCCATAGCTCAGCTTACTTCTACTTTTGAACAACCACCATCAGCCCGAGATAGTTTGATACCTCGGTCATTGAGAGATGCCTCAAAATCAAGCAACAATAAAAATGAGCAGGAGGAGGATTCTATGAACAGCAGAATAGAATCTCTTACTATACAAGAAGATGTGAAAGGTGGTGAAGCTGAAGATGATGAAAGCCTTCCAGTTTACCCATATGACCGCGTTAATACCGAATCTGAAGACCCTGCAACAGACATTGATGTGACTAAAAGAGAGGCTTATCTATCAGTGGAGGAGTTCAAAGAGAAACTTGGGATGGCTAAGAATGAATTTTACAAGTTGCCAAAATGGAAACAGAACAAACTCAAAATGGCTGTTCAATTGTTCTGA 2880 0.4122 MSISTRDLDPAFKGAGQKAGLEIWRIENFNPVPIPQSSYGKFFTGDSYVILKTTGTKSGALLHDIHYWLGKDTSQDEAGVAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGAASGFKHVEAEEHKTRLFVCRGKHVVNVKEVPFARSSLSHDDIFILDTDSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCDIAAVEDGRLMSDSDTGEFWGFFGGFAPLPRKTVNDDDKPADSHPPKLMCVEAGKAEPIEADSLTRELLDTTKCYIIDCGLELFAWMGRNSSLDERKSASGTAEELVSGTGRSKSYITRVIEGFETVMFKSKFDSWPQTTNVAHAEDGRSKVAERLKRQGLDVKGLLKTEPEKEEPEAYIDCTGNLRVWRVNGQEKVLLPASDQSKFYSGDCYIFQYSYPGEDREDHLIGTWIGNNSVEEDRASALSMAGKMVESMKFIPCLARIYEGSEPIQFQYILQSFIVYKGGFSDAYKNYIVEKEIPDETYNEEGVALFRIQGSGPENMQAIQTESVASSLNSAYCYILHDGPTVFSWSGSFTTADDQELVERMLDLIKPDLQCKLQKEGTESEKFWEILGGKTEYPSKKIVKDAENDPHLFSCDFSKAELKVKEIYNFSQDDLMTEDIFILDIHSEIFVWVGQQFDPKNRLQALTIGEKFLEHDFLQEKVSSVAPIYVVMEDSEPPFFTRFFKWESAKSAMLGNSFQRKLTIVKNGGTTPLDKPKRRASVSSGGRSSSLPEKSQRSRSVSVNPDRARVRGRSPAFTALTANFENPKDRNLSTPPPMVTKLYPKSMSPDSIKQAPKAAAIAQLTSTFEQPPSARDSLIPRSLRDASKSSNNKNEQEEDSMNSRIESLTIQEDVKGGEAEDDESLPVYPYDRVNTESEDPATDIDVTKREAYLSVEEFKEKLGMAKNEFYKLPKWKQNKLKMAVQLF* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0381 959 MobiDBLite consensus disorder prediction 860 874 - -
Lan1g0381 959 ProSiteProfiles Headpiece (HP) domain profile. 894 959 IPR003128 GO:0003779|GO:0007010
Lan1g0381 959 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Lan1g0381 959 SMART VILL_6 139 234 IPR007122 GO:0051015
Lan1g0381 959 SMART VILL_6 19 117 IPR007122 GO:0051015
Lan1g0381 959 SMART VILL_6 254 344 IPR007122 GO:0051015
Lan1g0381 959 SMART VILL_6 519 606 IPR007122 GO:0051015
Lan1g0381 959 SMART VILL_6 392 489 IPR007122 GO:0051015
Lan1g0381 959 SMART VILL_6 622 719 IPR007122 GO:0051015
Lan1g0381 959 SUPERFAMILY Actin depolymerizing proteins 384 528 - -
Lan1g0381 959 MobiDBLite consensus disorder prediction 883 899 - -
Lan1g0381 959 SUPERFAMILY VHP, Villin headpiece domain 884 959 IPR036886 GO:0003779|GO:0007010
Lan1g0381 959 CDD gelsolin_S4_like 387 482 - -
Lan1g0381 959 SUPERFAMILY Actin depolymerizing proteins 137 240 - -
Lan1g0381 959 CDD gelsolin_S5_like 518 608 - -
Lan1g0381 959 MobiDBLite consensus disorder prediction 754 775 - -
Lan1g0381 959 PANTHER VILLIN 1 959 IPR007122 GO:0051015
Lan1g0381 959 Gene3D Severin 517 612 IPR029006 -
Lan1g0381 959 Gene3D Severin 133 246 IPR029006 -
Lan1g0381 959 CDD gelsolin_S6_like 621 718 - -
Lan1g0381 959 Gene3D Severin 613 733 IPR029006 -
Lan1g0381 959 MobiDBLite consensus disorder prediction 738 912 - -
Lan1g0381 959 Pfam Villin headpiece domain 924 959 IPR003128 GO:0003779|GO:0007010
Lan1g0381 959 SUPERFAMILY Actin depolymerizing proteins 511 612 - -
Lan1g0381 959 CDD gelsolin_S3_like 254 343 - -
Lan1g0381 959 SMART VHP_1 924 959 IPR003128 GO:0003779|GO:0007010
Lan1g0381 959 Gene3D Severin 247 361 IPR029006 -
Lan1g0381 959 Pfam Gelsolin repeat 639 710 IPR007123 -
Lan1g0381 959 Pfam Gelsolin repeat 268 336 IPR007123 -
Lan1g0381 959 Pfam Gelsolin repeat 28 111 IPR007123 -
Lan1g0381 959 Pfam Gelsolin repeat 149 208 IPR007123 -
Lan1g0381 959 Gene3D Severin 389 502 IPR029006 -
Lan1g0381 959 Gene3D Villin headpiece domain 897 959 IPR036886 GO:0003779|GO:0007010
Lan1g0381 959 CDD gelsolin_S1_like 12 124 - -
Lan1g0381 959 Gene3D Severin 7 132 IPR029006 -
Lan1g0381 959 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Lan1g0381 959 PANTHER VILLIN-4 1 959 - -
Lan1g0381 959 SUPERFAMILY Actin depolymerizing proteins 223 348 - -
Lan1g0381 959 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Lan1g0381 959 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Lan1g0381 959 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Lan1g0381 959 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Lan1g0381 959 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Lan1g0381 959 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Lan1g0381 959 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Lan1g0381 959 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0381 Lan-Chr1 3004483 3012663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0381 - - gmx:100807762 1565.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1029 12 16958550 16968719 Lan1g0381 1 3004483 3012663 LSH
Lan1g0381 1 3004483 3012663 Lan14g0034 14 533831 537198 PCT
Lan4g0123 4 1846089 1860600 Lan1g0381 1 3004483 3012663 PCT