Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1029 ATGTCCATTTCTATTAGAGATTTGGATCCAGCTTTCAAGGGAGCTGGACAAAAGGCTGGACTTGAAATATGGCGAATTGAGAATTTTAATCCGGTTCTCATTCCTCAATCTTCGTATGGGAAATTTTTCACCGGGGACTCCTATGTAATTTTAAAGACAACTGGTACAAAAAGTGGTGCTCTGCTCCATGATATCCATTACTGGCTTGGCAAAAAAACCAGCCAGGATGAAGCGGGTGCTGCAGCCATCAAGACAGTTGAGTTGGATGCAGTTCTAGGAGGACGTGCTGTTCAATATCGTGAAGTACAAGGTCATGAAACTGAAAAATTCCTGTCTTATTTCAAACCATGTATTATACCTCAAGAAGGTGGAGCTGCCTCTGGTTTTAAACATGTTGAAGCTGAAGAACATAAAACAAGATTGTATGTATGCAGAGGGAAACATGTTGTACATGTTAAAGAGGTTCCTTTTGCTCGATCTTCACTCAGCCATGATGATATTTTTATTCTGGATACTGATTCCAAAATCTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCAAAAGCATTGGAAGTTGTACAGTATATTAAGGATACCTACCACGATGGAAAATGTGATATAGCTGCTGTTGAGGATGGAAGGTTGATGTCTGATTCTGAAACTGGAGAATTCTGGGGTTTCTTTGGGGGCTTTGCTCCTCTTCCACGGAAAACGGTCAACGATGACGATAAGCTTGCTGATTCTCATCCTCCAAGGCTGTTGTGTGTTGAAAAGGGGAAGGCAGAACCCATTGAGACCAGTTCTTTGACAAGGGAATTACTGGACACAAATAAATGCTATATTATAGATTGTGGGTTGGAAGTGTTTGCATGGATGGGCAGAAAATCTTCTCTAGATGAAAGAAAAAGTGCAAGCGGCGCTGCAGATGAGTTAGTAGGTGGCACTGGTCGCTCAAAGTCCTACATAATTCGTTTGATTGAAGGATTTGAAACTGTGATGTTCAAGTCCAAGTTTGATTCTTGGCCTCATACAACAAATGTAGCACAGGCTGAAGATGGACGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGATTGGATGTCAAGGGTCTCTTGAAAACTGATACTGTAAAAGAAGAACCTCAAGCCTACATAGATTGCACAGGGCATTTGCAGGTTTGGCGTGTGAGCGGCCAGGAAAAGGTTCTTCTTCCAGCCCATGACCAGTCAAAATTTTATAGTGGAGATTGCTACATCTTTCAGTATTCATATCCTGGAGATGATAAGGAAGAGCATCTTATAGGAACATGGATTGGAAACAATAGTGTTGAGGAAGATAGAGCATCAGCTCTTTCAATGGCAGGCAAAATGGTAGAATCAATGAAGTTTATTCCCTCCCTGGCTCGTATTTATGAAGGCAGTGAACCAATTCAATTTCATTCTATTCTCCAAAGCTTCATTGTTTATAAGGGTGGACTTAGTGATGGATACAAGAATTACATCGCGGAAAAGAATATACCAGATGATACATACAGTGGGGAGGGCGTTGCATTATTCCGCATCCAGGGCTTTGGACCTGAAAATATGCAAGCTGTACAAACTGACCCAGTTGCTTCCTCCTTGAATTCTGCTTATTGCTACATACTACATGACGGGCCTACTGTCTTTTCATGGTCAGGAAGTTTTACAACTGCCGATGACCAGGAACTTGTTGACAGAATGCTTGATTTGATAAAGCCGGATTTACAATGCAAACTACAAAAGGAAAATGCAGAATCTGAAAAGTTTTGGGAGATATTAGGAGGAAAAACAGAATATCCCACTCAAAAGATTGTGAGAGATGCTGAAAATGATCCTCACCTTTTTTCTTGCAACTTCTCAAAAGGAGAAATAAAGGTGAAAGAGATATACAACTTCTCTCAGGATGATTTGATGACGGAAGATATTTTCATCTTGGATATTCACTCGGCAATCTTTGTATGGGTTGGCCAGAAGTTTGATCCCAAGAGTAGATTGCAAGCTCTAACAATTGGTGAGAAATTTCTCGAGCACGATTTTCTTCTAGAAAAAGTATCTCGTGTAGCTCCAATATATATTGTCATGGAAGGCAGTGAGCCACCTTTCTTCACTCACTTCTTTAAATGGGAGTCTGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTTACAATAGTGAAAAGTGGTGGTACTCTACCTTTGGATAAACCCAAACGAAGAGCATCTGTAGCATATGGGGGAAGGTCTAATAGTCTTCCAGAAAAATCCCAGCGTTCGCGCAGCATGTCTGTCAGTCCTGATCGTGTTCGTGTGAGGGGAAGATCTCCAGCCTTTACTGCACTAGCAGCTAATTTTGAGAATCCTAAAGATAGGAACCTTTCAACTCCTCCTCCAATGATTAGAAAACTCTATCCAAAATCTATGTCACCAGATTCAATTAAACTTGCTCCTAAAGCCGCAGCGATAGCTCAGCTTACTTCTACTTTTGAACAGCCACCATCAGCACGAGATACTTTGATACCTCGGTCATTGAGAGCGAGTTCAGATGCCTCCAAATCAAGCCCCAATAAAAATGAGCAAGACGAAGATTCTATGAACAGCAGAATAGAATCTTTTACTATACAGGAAGATGTGAAAGAGGGTGAATCTGAAGATGATGAAGGCCTCCCAGTTTACCCACATGATCGCGTTAACACAGCCTCTGAAGATCCTGTGACAGACATTGATGTGACTAGACGAGAGGCATATCTATCAGTGTCGGAGTTCAAAGAAAAGTTAGGAATGGCTAAGAATGAATTTTACAAGTTGCCAAAATGGAAACAGAATAAACTCAAAATGGCTGTTCAATTGTTCTAA 2889 0.4102 MSISIRDLDPAFKGAGQKAGLEIWRIENFNPVLIPQSSYGKFFTGDSYVILKTTGTKSGALLHDIHYWLGKKTSQDEAGAAAIKTVELDAVLGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGAASGFKHVEAEEHKTRLYVCRGKHVVHVKEVPFARSSLSHDDIFILDTDSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCDIAAVEDGRLMSDSETGEFWGFFGGFAPLPRKTVNDDDKLADSHPPRLLCVEKGKAEPIETSSLTRELLDTNKCYIIDCGLEVFAWMGRKSSLDERKSASGAADELVGGTGRSKSYIIRLIEGFETVMFKSKFDSWPHTTNVAQAEDGRGKVAALLKRQGLDVKGLLKTDTVKEEPQAYIDCTGHLQVWRVSGQEKVLLPAHDQSKFYSGDCYIFQYSYPGDDKEEHLIGTWIGNNSVEEDRASALSMAGKMVESMKFIPSLARIYEGSEPIQFHSILQSFIVYKGGLSDGYKNYIAEKNIPDDTYSGEGVALFRIQGFGPENMQAVQTDPVASSLNSAYCYILHDGPTVFSWSGSFTTADDQELVDRMLDLIKPDLQCKLQKENAESEKFWEILGGKTEYPTQKIVRDAENDPHLFSCNFSKGEIKVKEIYNFSQDDLMTEDIFILDIHSAIFVWVGQKFDPKSRLQALTIGEKFLEHDFLLEKVSRVAPIYIVMEGSEPPFFTHFFKWESAKSAMLGNSFQRKLTIVKSGGTLPLDKPKRRASVAYGGRSNSLPEKSQRSRSMSVSPDRVRVRGRSPAFTALAANFENPKDRNLSTPPPMIRKLYPKSMSPDSIKLAPKAAAIAQLTSTFEQPPSARDTLIPRSLRASSDASKSSPNKNEQDEDSMNSRIESFTIQEDVKEGESEDDEGLPVYPHDRVNTASEDPVTDIDVTRREAYLSVSEFKEKLGMAKNEFYKLPKWKQNKLKMAVQLF* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1029 962 SMART VHP_1 927 962 IPR003128 GO:0003779|GO:0007010
Lan12g1029 962 SMART VILL_6 392 489 IPR007122 GO:0051015
Lan12g1029 962 SMART VILL_6 254 344 IPR007122 GO:0051015
Lan12g1029 962 SMART VILL_6 137 234 IPR007122 GO:0051015
Lan12g1029 962 SMART VILL_6 623 719 IPR007122 GO:0051015
Lan12g1029 962 SMART VILL_6 519 606 IPR007122 GO:0051015
Lan12g1029 962 SMART VILL_6 19 117 IPR007122 GO:0051015
Lan12g1029 962 SUPERFAMILY VHP, Villin headpiece domain 887 962 IPR036886 GO:0003779|GO:0007010
Lan12g1029 962 SUPERFAMILY Actin depolymerizing proteins 223 348 - -
Lan12g1029 962 Gene3D Severin 613 733 IPR029006 -
Lan12g1029 962 CDD gelsolin_S5_like 518 608 - -
Lan12g1029 962 MobiDBLite consensus disorder prediction 760 775 - -
Lan12g1029 962 PANTHER VILLIN 1 962 IPR007122 GO:0051015
Lan12g1029 962 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Lan12g1029 962 Gene3D Severin 247 359 IPR029006 -
Lan12g1029 962 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Lan12g1029 962 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Lan12g1029 962 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Lan12g1029 962 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Lan12g1029 962 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Lan12g1029 962 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Lan12g1029 962 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Lan12g1029 962 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Lan12g1029 962 CDD gelsolin_S6_like 621 718 - -
Lan12g1029 962 Gene3D Severin 517 612 IPR029006 -
Lan12g1029 962 MobiDBLite consensus disorder prediction 741 816 - -
Lan12g1029 962 SUPERFAMILY Actin depolymerizing proteins 382 525 - -
Lan12g1029 962 Gene3D Severin 7 132 IPR029006 -
Lan12g1029 962 Pfam Gelsolin repeat 150 208 IPR007123 -
Lan12g1029 962 Pfam Gelsolin repeat 639 712 IPR007123 -
Lan12g1029 962 Pfam Gelsolin repeat 29 111 IPR007123 -
Lan12g1029 962 Pfam Gelsolin repeat 270 314 IPR007123 -
Lan12g1029 962 CDD gelsolin_S4_like 387 485 - -
Lan12g1029 962 Gene3D Villin headpiece domain 900 962 IPR036886 GO:0003779|GO:0007010
Lan12g1029 962 MobiDBLite consensus disorder prediction 853 912 - -
Lan12g1029 962 Pfam Villin headpiece domain 927 962 IPR003128 GO:0003779|GO:0007010
Lan12g1029 962 CDD gelsolin_S3_like 254 343 - -
Lan12g1029 962 CDD gelsolin_S1_like 12 124 - -
Lan12g1029 962 Gene3D Severin 133 246 IPR029006 -
Lan12g1029 962 SUPERFAMILY Actin depolymerizing proteins 129 240 - -
Lan12g1029 962 PANTHER VILLIN-4 1 962 - -
Lan12g1029 962 CDD gelsolin_S2_like 138 217 - -
Lan12g1029 962 SUPERFAMILY Actin depolymerizing proteins 511 612 - -
Lan12g1029 962 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Lan12g1029 962 ProSiteProfiles Headpiece (HP) domain profile. 897 962 IPR003128 GO:0003779|GO:0007010
Lan12g1029 962 Gene3D Severin 381 515 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1029 Lan-Chr12 16958550 16968719 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1029 - - gmx:100807762 1598.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1029 12 16958550 16968719 Lan1g0381 1 3004483 3012663 LSH
Lan12g1029 12 16958550 16968719 Lan14g0034 14 533831 537198 PCT
Lan4g0123 4 1846089 1860600 Lan12g1029 12 16958550 16968719 PCT