Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0267 ATGGGTTCTCAAATAAGGCTTCTGGGTTGGTATTCATGGATCTACTATTTTGTATGCTTCAGCTTCATTGTAGTGAATGCTGTGAATGGTGAAAGAAGAGGAGATGCAATAGAGAAAGGTTTTGTTTTTATTCATGGGAAATCTTTTATTGGAAAGATTGATGATGATTTTGTGTGTGCCACTTTGGATTGGTGGCCACCTCAGAAATGTGACTATGGAAGATGTAGTTGGGGTCTTGCTTCTCTTCTTAATCTGGACCTCAACAACAAAATTTTGTTAAATGCAGTAAAAGCATTTTCACCCTTGAAAATTAGATTAGGAGGAACTTTGCAAGATAAGGTCACATATGGTACTGAAGATTATCACCATCCATGTACTCCTTTTGTTTGGAACACTAGTGAAATGTTTGGTTTCACTAAAGGGTGCTTACCCTTGCATAGATGGGATGAGCTAAACAGCTTTTTCAAAAAAGCAGGGGCTAAGATTATATTTGGATTGAATGCTCTTGCTGGAAAGTCTATACAATCTGGTTCTGCAGTTGGGCCTTGGGACTACTCCAATGCCGAATCATTTATACGTTATACCGTAAAAAAGAACTACATCATTCATGGTTGGGAACTTGGCAATGAATTATGTGGGAATGGAATTGGAACAAGTGTTTCTGCAGATCAATATGTTTCCGATGTTGCTTCTTTACGACTCATCATTCAAAATGCATACAAGGGGATTGAGCCTAAGCCACTACTTATTTCACCTGGAGGCTTCTTTGATGCAACTTGGTTCAAAGAATTTGTAACCAAAGCGGGTAAATCTGTGGATGTGGTCACTCACCACATTTATAACCTTGGTCCAGGAGTTGATGAACACATAACTGAAAAAATTCTCGATCCTTCATATCTCAATGGAGAGGCTAGCACATTCAACGGCCTCAAAAACATACTTCGAAGTTCGGCAACCTCAGCAACAGCATGGGTTGGTGAGGCAGGAGGAGCTTACAATAGTGGCCATCATCTTGTGTCTGATGCATTTGTCTACAGCTTCTGGTATTTGGATCAACTTGGCATGTCAGCTACCTATGACACTAGAACCTATTGCAGACAAACTTTGATTGGAGGAAACTATGGTTTATTGAATACTAGTACTTTCATGCCAAATCCAGATTACTATAGTGCTCTTCTATGGCATCGACTCATGGGACGACGAGTCCTCGCAACTAGCTTCTACGGGACAAAGAAGATCAGAGCTTATGCACACTGTGCAAAACAATCTCAAGGAATCACAATACTACTACTCAACTTGGGCAATAGCACCAGTGTTCAAGCCAAACTGGCCTTGAGATTTGCTAAGGTACCTTACGGTCGCGAAAAATTTAGAGAAGAGTACCATTTAACAACGAAGAGTCAGAACTTACATAGCCAAGTCATGTTACTAAATGGTAACATTTTAAGTGTAAACAAATATGGTGATATTCCTCCTTTGAAGCCTCTATATGTAGATCCATCAAAGCCAATAGTAGTTGGTCCTCTTTCTGTTGTATTTGCACATATACAAGATATTATTCTTCCAGCTTGCACCTAA 1578 0.3967 MGSQIRLLGWYSWIYYFVCFSFIVVNAVNGERRGDAIEKGFVFIHGKSFIGKIDDDFVCATLDWWPPQKCDYGRCSWGLASLLNLDLNNKILLNAVKAFSPLKIRLGGTLQDKVTYGTEDYHHPCTPFVWNTSEMFGFTKGCLPLHRWDELNSFFKKAGAKIIFGLNALAGKSIQSGSAVGPWDYSNAESFIRYTVKKNYIIHGWELGNELCGNGIGTSVSADQYVSDVASLRLIIQNAYKGIEPKPLLISPGGFFDATWFKEFVTKAGKSVDVVTHHIYNLGPGVDEHITEKILDPSYLNGEASTFNGLKNILRSSATSATAWVGEAGGAYNSGHHLVSDAFVYSFWYLDQLGMSATYDTRTYCRQTLIGGNYGLLNTSTFMPNPDYYSALLWHRLMGRRVLATSFYGTKKIRAYAHCAKQSQGITILLLNLGNSTSVQAKLALRFAKVPYGREKFREEYHLTTKSQNLHSQVMLLNGNILSVNKYGDIPPLKPLYVDPSKPIVVGPLSVVFAHIQDIILPACT* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0267 525 Pfam Glycosyl hydrolase family 79, N-terminal domain 41 354 IPR005199 GO:0016020|GO:0016798
Lan1g0267 525 SUPERFAMILY (Trans)glycosidases 53 398 IPR017853 -
Lan1g0267 525 PANTHER HEPARANASE-RELATED 453 524 - -
Lan1g0267 525 PANTHER HEPARANASE-RELATED 18 444 - -
Lan1g0267 525 Gene3D Glycosidases 76 396 - -
Lan1g0267 525 PANTHER HEPARANASE-LIKE PROTEIN 3 453 524 - -
Lan1g0267 525 PANTHER HEPARANASE-LIKE PROTEIN 3 18 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0267 Lan-Chr1 1964290 1967808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0267 34 525 Glycoside Hydrolase AT5G61250 46.243 2.72e-169 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0267 K07964 - gmx:100778008 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1136 12 17703665 17706739 Lan1g0267 1 1964290 1967808 LSH
Lan1g1151 1 21531032 21534567 Lan1g0267 1 1964290 1967808 LSH
Lan1g0267 1 1964290 1967808 Lan15g0247 15 2786498 2790608 PCT
Lan15g0247 15 2786498 2790608 Lan1g0267 1 1964290 1967808 PCT