Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0247 ATGGGTTCAAAGATTAAGCTTCTGGGTATGTGCATATGGCTATTTTACTTGCCAAGTTTCACCTTCATTGTTGTGAAAACACAGGGTAATGAAAGTGAAAGAAGTGCAACTTTGAAGGGTAGTGTTGTCATTAATGGAAGATCTGTGATTGGAAATATTGATGTTGATTTTGTTTGTGCAACTCTTGATTGGTGGCCCCCTGAGAAATGTGACTATGGAAGATGCAGTTGGGGTCTTGCTTCACTTCTCAATTTGGACCTCAACAACAAGATTTTGTTGAATGCAGTGAAAGCTTTTTCACCTTTGAAACTTAGATTAGGTGGAAGTTTGCAAGACAAGGTCATATATGAGACAGAAAATGATCAACAACAATGTACTCCTTTTCATGCTGACACTACTCAAATGTTCGGTTTCACACAAGGGTGCTTCCCATTGAAGAGATGGGATGAGCTAAACAACTTTTTTGAAAAAGCAGGGGCTAAGATTGTCTTCGGATTAAATGCTCTTGTTGGAAGAACTATATCTGGCTCTGCAGTTGGACCTTGGAACTACACCAATGCCGAATCCTTTATTCGTTACACTGTCTCAAAGAACTACGCCATCGATGGATGGGAACTTGGAAATGAATTGAGTGGGAATGGAGTTGGAACTAGTATCTCAGCAGACCAATATGCTTCTGATCTAATCGCTTTACGAAACATAGTTTACAATGCATATGAAGCGATTGATCCAAAGCCACTAATCATTGCACCTGGAGGTTTCTTCTCAGCAGATTGGTTCAAGGAGTTTATAAGCAAATCCGACACATCTTTGGATGTGGCTTCCCACCACATTTATAACCTTGGACCAGGAGTTGATGAGCACCTTGTGGAAAAAATTCTTAATCCTTCCTATCTTGATGGAGTGGCAAGCACATTTAGAGACCTCAAAAATGTACTTGAAAGTTCAGGAACCGCAGCAACCACATGGGTTGGTGAGTCAGGAGGGGCTTACAATAGCGGCCATCATCTTGTATCGGATGCATTTGTTTACAGTTTCTGGTATTTGGATCAGCTTGGCATGTCAGCTGCATACGATACTAAAACGTATTGCAGACAGAGCTTGATAGGAGGAAACTATGGTTTACTTAATACCACTAATTTCATTCCAAATCCGGATTACTATAGTGCTCTTCTTTGGCATAGACTCATGGGAAGACATGTACTATCAACTACCTTCTCTGGGACAAAGAAGATAAGAGCTTATGCACATTGTTCAAAGCAATCTAAAGGAATCACAATACTATTGATCAACCTGGACAGCAGCACGACCGTCGAAGCCGATGTGACCTTGAGCAGCACCAAGAATTTCTTGCATAGAAAAATGTCTGATGATTCAAAAGTAGTGAAGCTACCTCTCCATTATGCAACAGAAACAGCAAGAGAAGAGTACCATCTAACTCCACATGATGGGAATATACATAGCCAAATCATGTTATTAAATGGAAAAACTCTAACAGTAAACTCAGATGGGGACATTCCTTCTTTGGAGCCTACATATGTAAACTCATCAAACCCAATAATTGTTGCACCTTACTCCATTGTATTTGCTCATATACCAGATGCTGTAGTTAAAGCTTGTAGTTAG 1626 0.4016 MGSKIKLLGMCIWLFYLPSFTFIVVKTQGNESERSATLKGSVVINGRSVIGNIDVDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKILLNAVKAFSPLKLRLGGSLQDKVIYETENDQQQCTPFHADTTQMFGFTQGCFPLKRWDELNNFFEKAGAKIVFGLNALVGRTISGSAVGPWNYTNAESFIRYTVSKNYAIDGWELGNELSGNGVGTSISADQYASDLIALRNIVYNAYEAIDPKPLIIAPGGFFSADWFKEFISKSDTSLDVASHHIYNLGPGVDEHLVEKILNPSYLDGVASTFRDLKNVLESSGTAATTWVGESGGAYNSGHHLVSDAFVYSFWYLDQLGMSAAYDTKTYCRQSLIGGNYGLLNTTNFIPNPDYYSALLWHRLMGRHVLSTTFSGTKKIRAYAHCSKQSKGITILLINLDSSTTVEADVTLSSTKNFLHRKMSDDSKVVKLPLHYATETAREEYHLTPHDGNIHSQIMLLNGKTLTVNSDGDIPSLEPTYVNSSNPIIVAPYSIVFAHIPDAVVKACS* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0247 541 Pfam Glycosyl hydrolase family 79, N-terminal domain 40 353 IPR005199 GO:0016020|GO:0016798
Lan15g0247 541 PANTHER HEPARANASE-RELATED 5 540 - -
Lan15g0247 541 SUPERFAMILY (Trans)glycosidases 53 397 IPR017853 -
Lan15g0247 541 PANTHER HEPARANASE-LIKE PROTEIN 3 5 540 - -
Lan15g0247 541 Gene3D Glycosidases 76 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0247 Lan-Chr15 2786498 2790608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0247 10 541 Glycoside Hydrolase AT5G07830 47.794 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0247 K07964 - gmx:100802477 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1136 12 17703665 17706739 Lan15g0247 15 2786498 2790608 PCT
Lan1g1151 1 21531032 21534567 Lan15g0247 15 2786498 2790608 PCT
Lan1g0267 1 1964290 1967808 Lan15g0247 15 2786498 2790608 PCT
Lan15g0247 15 2786498 2790608 Lan12g1136 12 17703665 17706739 PCT
Lan15g0247 15 2786498 2790608 Lan1g1151 1 21531032 21534567 PCT
Lan15g0247 15 2786498 2790608 Lan1g0267 1 1964290 1967808 PCT