Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0595 ATGAGGGGAGAAACATTATGGATCAGCCACTATGACAATGCTGCACGAATGGAGAATGGGAAGTTTGATGCAATTTCAGAACTCGACGAGGAAGGTGATAAAGAAGCAACTGCTGTTTCTTTAGATGTAAATTTACCCGATGACTTATTGGAAATCATCCTAGCTTATCTTCCCATCGCAAGCATTTTCAGAGCTGGTTGTGTGTGTAAAAGATGGCACATGATTGTTCATTCTAAAAGATTTTTATGGACCCTTTCACATGTTGGACCACAGAAGCCTTGGTACTTCATGTTTACTAGCTCTTATCAACCGATCGGTTATGCTTATGATCCTGTCCTTCGGAAATGGCATGGCATAGAACTTCCATTCATCGAAACTTCTAATTGGTTCATTGCTTCTTCATGTGGCATGGTTTGCTTCATGGACAATGACAGCAGAAGCGAATTATGTGTCTGCAACCCTATTACCAAAACCTGCAGGAAGCTCAAGGAGCCACCAAGTTTGAAAATTTCTGATTATAGCGCATTAGCGTTCTCAGTTAACAGGGAATCTCAGAGTTATGCCGTCGCAATTGTTAAATCGAAACAAGTCCCTGAGAACTTTTTTCAATGGGATATCTCAATTAATATATACGACTCTGAGGAAGTAACCTGGGGGACGTCTATAACCGAGGTTTTGACAGGATGGAGAGGTGGTGATGAGAGTGTGATATGTAATGGAGTGTTATACTTTTTAGTTTACTCAGCCGGGGTTGGTCCACCAGAAAATCGCCACGCTCTAATTGCATACAATGTGTCGAGCCGTGATCCTCAAGTTCGCTTAGCGAGGAGCTTTATTCAAGTACCCTGTTCTCTAACATGTGGCCGTCTGATGAATATGAAGGAGAAGCTTGTGATGGTGGGAGGAATCGGTAAACTGGATCGACCAGACATAATTAAAGGGATTGGTATCTGGATTCTGAATGATAGAAAGTGGGAAGAGATTGCTAAAATGCCCCACAAATTCTTCCAAGGCTTTGGAGAACTGGATGATGTTTTTGCGAGCCGTGGTGCCGATGATCTAATTTATATTCAGAGTTATGGAGCTCCGGCACTTCTCATTTTTGACATGAATCATAAGCATTGGAAGTGGGCACAGAAGTGCCCTGTGACAAAAAGGTTCCCATTGCAACTTTTCACTGGTTTTTGCTTTGAGCCTAACCTTGAATTTGCTCCATAG 1218 0.4228 MRGETLWISHYDNAARMENGKFDAISELDEEGDKEATAVSLDVNLPDDLLEIILAYLPIASIFRAGCVCKRWHMIVHSKRFLWTLSHVGPQKPWYFMFTSSYQPIGYAYDPVLRKWHGIELPFIETSNWFIASSCGMVCFMDNDSRSELCVCNPITKTCRKLKEPPSLKISDYSALAFSVNRESQSYAVAIVKSKQVPENFFQWDISINIYDSEEVTWGTSITEVLTGWRGGDESVICNGVLYFLVYSAGVGPPENRHALIAYNVSSRDPQVRLARSFIQVPCSLTCGRLMNMKEKLVMVGGIGKLDRPDIIKGIGIWILNDRKWEEIAKMPHKFFQGFGELDDVFASRGADDLIYIQSYGAPALLIFDMNHKHWKWAQKCPVTKRFPLQLFTGFCFEPNLEFAP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0595 405 SUPERFAMILY Galactose oxidase, central domain 86 382 IPR011043 -
Lan19g0595 405 TIGRFAM F_box_assoc_1: F-box protein interaction domain 135 336 IPR017451 -
Lan19g0595 405 SMART fbox_2 45 85 IPR001810 GO:0005515
Lan19g0595 405 Gene3D - 35 85 - -
Lan19g0595 405 Pfam F-box domain 44 82 IPR001810 GO:0005515
Lan19g0595 405 PANTHER BNAA09G39300D PROTEIN 1 405 - -
Lan19g0595 405 SUPERFAMILY F-box domain 42 144 IPR036047 GO:0005515
Lan19g0595 405 ProSiteProfiles F-box domain profile. 39 86 IPR001810 GO:0005515
Lan19g0595 405 PANTHER F-BOX FAMILY PROTEIN 1 405 IPR045048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0595 Lan-Chr19 11240092 11242353 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0595 - - lang:109339809 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0595 19 11240092 11242353 Lan16g1259 16 20599526 20604150 LSH
Lan19g0595 19 11240092 11242353 Lan11g0976 11 10525542 10528388 PCT
Lan11g0976 11 10525542 10528388 Lan19g0595 19 11240092 11242353 PCT