Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0976 ATGGCGGGAGAAACATCGTGGACCAGCGATTTCAATTATGCCCCTCGATGGGAGACAAGGGTGTATGATTCATTTTCCGAATTTGATGAGGAAATTGATAACGAAGAACCTGGTGTTTCTATGGACGAGCTTTTGCCTGATGAACTGTTGGAACGTATCTTCACCTATCTCCCTACTGGGAGCATTTTCAGAGCCGGCTGTGTGTGTAAAAGATGGCACGAGATTGTTGCTTCGAGAAGGTTTTTATGGAGTCCTTCCCATGTGATACCACAGAAACCTTGGTACTTTATGTTTACCAACTCTGATGAACCAGATGGTTATGCTTATGATCATGTCCTTCGAAAATGGCATGGCATTGAACTTCCCTGCATCAACTCTTCTAATTGGTTCGTTGCTTCATCATATGGCTTAGTTTGCTTCATGGACAATGACAGCAGAACCAAATTGTATATATGCAACCCTATTACCAAAAGCCGCAGAAAGCTCAAGGAGCCTCCAGGTTTAAAATTTTCCGATTACAGTGCATTAGCAATCTCAGTGAGCAGGGAATCCCATAGTTACAATGTAGCAATTGTAAAATCGAAGGAAGTCCCTGATAACTTTTTCCAGTGGGATATCTCGATTCATATATACAGTTCGGAGAAAAAGACCTGGGAGACGACCTTAACAGAGGTTTTCATGGGGTGGAGAGGTGGTGATGAGAGTGTAATATGCAATGGTGTGCTATACTTTTTAGTTTACTCAACTGGCGGTGGTCCACCAGGAAGTCGTCACGCCCTAGTTGCATATAACATTGCCAACCGATCTTCACAAGGTAGCTTGAAAAGGAGCTTTATCGACATACCGTATTCTCTGACTTGTGGCCGTCTGATGAATCTGAATGAGAAGCTCGTAATGGTGGGAGGGATTGGCAAGCAAGTTCGACCTGACATAATAAAAGGAATTGGCATCTGGCTTCTAAATGATCGAAAGTGGGAAGAAGTTGCTAAAATGCCCCACAAATACTTCCAAGGTTTCGGAGAGTTGGATGATGTTTTTGCCAGCAGTGGTGCAGATGATCTGATATATATCCAAAGTTATGGATCTCCAGCACTTCTTATATTTGACATGAACATTAAACAATGGAAATGGTCACATAAATGCCCTGTACAAAAGAGGTTCCCACTGCAGCTTTTCACTGGTTTCTGCTTTGAGCCTAGGCTTGAAATTTCTCCATAA 1218 0.4269 MAGETSWTSDFNYAPRWETRVYDSFSEFDEEIDNEEPGVSMDELLPDELLERIFTYLPTGSIFRAGCVCKRWHEIVASRRFLWSPSHVIPQKPWYFMFTNSDEPDGYAYDHVLRKWHGIELPCINSSNWFVASSYGLVCFMDNDSRTKLYICNPITKSRRKLKEPPGLKFSDYSALAISVSRESHSYNVAIVKSKEVPDNFFQWDISIHIYSSEKKTWETTLTEVFMGWRGGDESVICNGVLYFLVYSTGGGPPGSRHALVAYNIANRSSQGSLKRSFIDIPYSLTCGRLMNLNEKLVMVGGIGKQVRPDIIKGIGIWLLNDRKWEEVAKMPHKYFQGFGELDDVFASSGADDLIYIQSYGSPALLIFDMNIKQWKWSHKCPVQKRFPLQLFTGFCFEPRLEISP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0976 405 SUPERFAMILY Galactose oxidase, central domain 107 383 IPR011043 -
Lan11g0976 405 PANTHER F-BOX FAMILY PROTEIN 1 405 IPR045048 -
Lan11g0976 405 Pfam F-box-like 45 84 IPR001810 GO:0005515
Lan11g0976 405 ProSiteProfiles F-box domain profile. 39 86 IPR001810 GO:0005515
Lan11g0976 405 SUPERFAMILY F-box domain 35 144 IPR036047 GO:0005515
Lan11g0976 405 SMART fbox_2 45 85 IPR001810 GO:0005515
Lan11g0976 405 TIGRFAM F_box_assoc_1: F-box protein interaction domain 136 350 IPR017451 -
Lan11g0976 405 Gene3D - 34 85 - -
Lan11g0976 405 Gene3D - 90 388 IPR015915 GO:0005515
Lan11g0976 405 PANTHER BNAA09G39300D PROTEIN 1 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0976 Lan-Chr11 10525542 10528388 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0976 - - gmx:100817678 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0976 11 10525542 10528388 Lan11g0976 11 10525542 10528388 ECH
Lan19g0595 19 11240092 11242353 Lan11g0976 11 10525542 10528388 PCT
Lan16g1259 16 20599526 20604150 Lan11g0976 11 10525542 10528388 PCT
Lan11g0976 11 10525542 10528388 Lan19g0595 19 11240092 11242353 PCT
Lan11g0976 11 10525542 10528388 Lan16g1259 16 20599526 20604150 PCT