Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0480 ATGGCAGAAGAAACTCCTAAAACAGCATTAGAAACAACAACAACACATGAAGAAGCAGTGGTGCATGTAGAGGAAGAAGTTAAGGTAACTGATGTTACACTTGCTGACAAAAACAACAACACAGAAGCTGAAGCTGATGCTGAGGAAGTTACAGAAGCTGGAACTGAAGGTGAAGCTGAGAAGAAGAAGCATGTTGAAGAGGGTGGTGAAAAAATAGCTGATTCTGATTCCTTCAAGGAAGAGAGCACAAAAGTTTCTGACCTATCTGAAGCTGAGAAGAAAGGACTACAAGAGCTTAAGCAGCTTATTCAAGAAGCACTTAACAAACATGAGTTTTCTTCACTTGCTGTTAACTTACCCAAAGAAGAAGAAAAGCCAGAAACATTAGCTGCTGATGCCAACAAGGAACAAGTTTCAGAAGCTGTTGCTGATGTTGAAACAAAAACAGAAGACAAAGAACATGTTTCAGAATCAGTAGCTGATGATGTTGCAACAGAAAAAGGAGAGAAGAAAGAAGAAGACCAACCTGCAAAAATAGAAGAAGCTGCACCAATAGTTAAAGAAACATATGAGCCAGAAAAACCTACAAAAACTGATGAAAAAGAAGAAGAAGAAGCACTAGAAGTGAAAGAAACTAAGGTGGAGATTGCTACTGTAGATGAAGATGGAGCCAAAACTGTGGAGGCTATTGAAGAAACCATTGTAGCTGTTTCTTCTTCAACTTCAACTGTACAAGAATCTTCAACCAAAGAAGAAGAAACTAGCAAGGATGAAACTTCAGCCTCATCACCACCATTGCTGCCACCAGAAGAGGTATCCATCTGGGGTATACCACTCCTTTCAGATGAGAGAAGTGATGTTATTCTCTTGAAGTTTCTTCGTGCCAGAGACTTCAAGGTGAAAGAAGCTTTCACCATGATCAAGAACACAATTAAGTGGAGAAATGAGTTTGGGATTGATGAGTTGTTGGAACAAGAGAATTTGGTTGATGATGATTTGGAGAAAGTGGTGTACATGCATGGTTTTGATAAGGAAGGTCACCCTGTGTGTTACAATATCTATGGTGAGTTCCAGAACAAAGAAGTGTATAAGAAAACTTTCTCTGATGAGGAGAAAAGAGAGAAATTTCTGAGGTGGAGGATTCAGTTTCTTGAAAGAAGTATAAGGAAATTGGATTTTACACCTGGTGGTATTTCTACTCTTGTTCAGGTTAATGATCTCAAGAATTCTCCTGGACCTGGGAAATGGGAACTAAGACAAGCTACCAAACAGGCTCTTCAATTGCTTCAGGACAATTATCCTGAATTTGTAGCCAAACAGGTATTCATCAATGTGCCATGGTGGTACTTAGCAGTGAACAGAATGATAAGCCCTTTTCTTACACAGAGAACCAAAAGCAAGTTTGTGTTTGCTGGGCCTTCCAAATCAGCTGAGACCCTTTTAAGATACATAGCTCCAGAGCAACTTCCGGTCAAATATGGTGGACTAAGCAAAGATGGGGAATTTGGAATTACTGATACTGTTACAGAAATTACAGTGAAGCCAGCATCTAAACATAATGTGGAATTCCCAGTTACTGAGAACTGTCAACTTTCTTGGGAGCTGAGAGTAATAGGGTGGGATATAAGCTATGGTGCAGAGTTTGTGCCAAGCACAGAAGGAAGCTATACAGTAATCATTCAAAAGGATAGAAAAGTTACTTCATCAGAAGAACCAGTGATTTATAATAGTTACAAAATTGGTGAACCTGGCAAAGTTGTTCTCACCATTGATAACCAAAGTTCTAAGAAGAAGAAACTCTTGTACCGTTTGAAGACCATACCTAACTCCTCATCTGAATGA 1842 0.3931 MAEETPKTALETTTTHEEAVVHVEEEVKVTDVTLADKNNNTEAEADAEEVTEAGTEGEAEKKKHVEEGGEKIADSDSFKEESTKVSDLSEAEKKGLQELKQLIQEALNKHEFSSLAVNLPKEEEKPETLAADANKEQVSEAVADVETKTEDKEHVSESVADDVATEKGEKKEEDQPAKIEEAAPIVKETYEPEKPTKTDEKEEEEALEVKETKVEIATVDEDGAKTVEAIEETIVAVSSSTSTVQESSTKEEETSKDETSASSPPLLPPEEVSIWGIPLLSDERSDVILLKFLRARDFKVKEAFTMIKNTIKWRNEFGIDELLEQENLVDDDLEKVVYMHGFDKEGHPVCYNIYGEFQNKEVYKKTFSDEEKREKFLRWRIQFLERSIRKLDFTPGGISTLVQVNDLKNSPGPGKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETLLRYIAPEQLPVKYGGLSKDGEFGITDTVTEITVKPASKHNVEFPVTENCQLSWELRVIGWDISYGAEFVPSTEGSYTVIIQKDRKVTSSEEPVIYNSYKIGEPGKVVLTIDNQSSKKKKLLYRLKTIPNSSSE* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0480 613 MobiDBLite consensus disorder prediction 54 91 - -
Lan15g0480 613 Coils Coil 89 109 - -
Lan15g0480 613 MobiDBLite consensus disorder prediction 237 268 - -
Lan15g0480 613 PANTHER PATELLIN-LIKE PROTEIN 1 610 - -
Lan15g0480 613 Gene3D - 246 316 - -
Lan15g0480 613 PRINTS Cellular retinaldehyde-binding protein signature 288 310 - -
Lan15g0480 613 PRINTS Cellular retinaldehyde-binding protein signature 453 472 - -
Lan15g0480 613 PANTHER PATELLIN-1 1 610 IPR044834 GO:0008289
Lan15g0480 613 SUPERFAMILY CRAL/TRIO domain 336 498 IPR036865 -
Lan15g0480 613 MobiDBLite consensus disorder prediction 139 209 - -
Lan15g0480 613 MobiDBLite consensus disorder prediction 119 209 - -
Lan15g0480 613 SMART CRAL_TRIO_N_2 285 310 IPR011074 -
Lan15g0480 613 MobiDBLite consensus disorder prediction 31 91 - -
Lan15g0480 613 SMART sec14_4 331 498 IPR001251 -
Lan15g0480 613 Pfam CRAL/TRIO, N-terminal domain 270 309 IPR011074 -
Lan15g0480 613 Gene3D GOLD domain 511 607 - -
Lan15g0480 613 SUPERFAMILY CRAL/TRIO N-terminal domain 85 325 IPR036273 -
Lan15g0480 613 CDD SEC14 332 496 IPR001251 -
Lan15g0480 613 Pfam CRAL/TRIO domain 335 495 IPR001251 -
Lan15g0480 613 Gene3D - 326 510 IPR036865 -
Lan15g0480 613 ProSiteProfiles GOLD domain profile. 505 606 IPR009038 -
Lan15g0480 613 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 326 501 IPR001251 -
Lan15g0480 613 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 507 608 IPR036598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0480 Lan-Chr15 11264529 11269057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0480 289 490 Acyl Lipid Metabolism Gene Families AT1G55840 29.245 2.19e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0480 - - gmx:100805585 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0480 15 11264529 11269057 Lan15g0480 15 11264529 11269057 ECH
Lan15g0480 15 11264529 11269057 Lan14g0412 14 9135333 9139710 LSH
Lan1g1524 1 25707569 25710766 Lan15g0480 15 11264529 11269057 PCT
Lan15g0480 15 11264529 11269057 Lan1g1524 1 25707569 25710766 PCT