Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0412 ATGGCAGAGGAAACTCCTAAAACAACACTACCAATAACAACTGAAGAAGAAGAAGAAGCAGTGGTAACTAATGTTTCACTTGCTGACAAAAACAACAACACAGATGCTGAAAAAGTTGCTGAGTTTAGTTCTTTCAAGGAAGAGAGTACTAGAGTTTCTGAATTACCTGAAGCTGAGAAGAAAGCACTTGAAGAGCTTAAGCAGCTTATTCAGGAATCACTTATCAAGCATGAGTTTTTTTCACTTGCTCTCAACCCACCCAAAGAAGAAAAAAAGTCAGAATCATTAGTTGCTGATAAAAAGGAACATGTTTTAGAACATGTTTCTGATTTGGAAACAAAAACAGAAGAAAAGGGACAAGTTTTAGAATCAGTCGTTGATGTTGTTGCAACAAAAAAAGGAGAGAAGAAAGAAGAAGAAGACCAACCTACAAAAACAGAAGAAGAAGCTGCACCAGAAGTGAAAGAAACAGAAGAGTTTGAGAATAATACTAAAACAGAAAAAGAAGGAGAGAAGAAAGAAGATGAACCAAAAGTGAAAGTAACTAAGGTGGTTTTTGCTTCTTCTATAGATGAAGATGGAGCTAAAACAGTGGAAGCTATTGAAGAAACCGTTGTAGCTGTTTCTTCTATAACTACTTCCACTGTTCCAGAACCTTCAACCAAAGAAGAAGAAGAAGCAAAGGAAGATAACAAAGATGAAGCTTTATCAACACCAACATTGGTACCACCAGAAGAGGTTTCCATTTGGGGTGTACCACTTCTTTTAGATGAGAGAACCAATGTGATTCTCTTGAAGTTTCTTCGTGCAAGAGACTTCAAGGTAAAAGAAGCATTCACCATGATAAAGAACACAATCAAATGGAGAAAAGAGTTTGGAATTGATGAGTTATTGGAACAACAGAACTTGGTTAATGATGATTTGGAGAAAGTGGTGTACATGCATGGTTTTGACAAAGAAGGACACCCTGTGTGTTATAACATATATGGTGAGTTTCAGAACAAGGAAGTGTATAAGAAAACTTTTTCTGATGAGGAAAAGAGAGAGAAGTTTCTGAGATGGAGGATTCAGTTTCTTGAGAAGAGTATAAGGAAATTGGATTTTACACCTGGTAGTGTTAGTACTATTGTTCAGGTTAATGATCTAAAGAATTCTCCTGGACCTGGGAAATGGGAACTTAGACAAGCTACCAAACAGGCCCTTCATTTGCTTCAGGATAATTATCCTGAGTTTGTAGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTACTTGGCAGTGAACAGAATGATAAGCCCTTTTCTCACACAGAGAACCAAAAGCAAGTTTGTCTTTGCTGGGCCTCCCAAATCTGCTGAAACCCTTTTAAGATACATAGCTCCAGAGCAACTTCAAGTTAAGTATGGCGGACTAAGCAAAGATGGGGAATTTGGAAGTAATGATGTTGTTACAGAAATTACAGTGAGACCAGCTGCTAAACATACTGTGGAATTTTCAGTTACTGAGAACTGTGTACTTTCTTGGGAGCTGAGAGTAATAGGGTGGGATGTAAGCTATGGTGCAGAGTTTGTGCCAAGCACAGAAGGAAGCTATACAATAATCATTCAGAAGGCTAGAAAGGTTGCTTCATCAGAAGAACCAGTGGTTTATAATAGTTACAAAGTTGGTGAACCTGGCAAAATTGTTCTCACCATTGATAACGAAAGCTCCAAGAAGAAGAAACTCTTATACCGTTTGAAGACCAAACCTTCCTCCTTTGACTGA 1764 0.3804 MAEETPKTTLPITTEEEEEAVVTNVSLADKNNNTDAEKVAEFSSFKEESTRVSELPEAEKKALEELKQLIQESLIKHEFFSLALNPPKEEKKSESLVADKKEHVLEHVSDLETKTEEKGQVLESVVDVVATKKGEKKEEEDQPTKTEEEAAPEVKETEEFENNTKTEKEGEKKEDEPKVKVTKVVFASSIDEDGAKTVEAIEETVVAVSSITTSTVPEPSTKEEEEAKEDNKDEALSTPTLVPPEEVSIWGVPLLLDERTNVILLKFLRARDFKVKEAFTMIKNTIKWRKEFGIDELLEQQNLVNDDLEKVVYMHGFDKEGHPVCYNIYGEFQNKEVYKKTFSDEEKREKFLRWRIQFLEKSIRKLDFTPGSVSTIVQVNDLKNSPGPGKWELRQATKQALHLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPPKSAETLLRYIAPEQLQVKYGGLSKDGEFGSNDVVTEITVRPAAKHTVEFSVTENCVLSWELRVIGWDVSYGAEFVPSTEGSYTIIIQKARKVASSEEPVVYNSYKVGEPGKIVLTIDNESSKKKKLLYRLKTKPSSFD* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0412 587 SMART CRAL_TRIO_N_2 260 285 IPR011074 -
Lan14g0412 587 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 301 476 IPR001251 -
Lan14g0412 587 SUPERFAMILY CRAL/TRIO domain 311 473 IPR036865 -
Lan14g0412 587 Gene3D - 221 291 - -
Lan14g0412 587 PANTHER PATELLIN-1 14 148 IPR044834 GO:0008289
Lan14g0412 587 PANTHER PATELLIN-1 140 586 IPR044834 GO:0008289
Lan14g0412 587 SMART sec14_4 306 473 IPR001251 -
Lan14g0412 587 SUPERFAMILY CRAL/TRIO N-terminal domain 51 299 IPR036273 -
Lan14g0412 587 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 484 581 IPR036598 -
Lan14g0412 587 MobiDBLite consensus disorder prediction 129 176 - -
Lan14g0412 587 MobiDBLite consensus disorder prediction 219 235 - -
Lan14g0412 587 ProSiteProfiles GOLD domain profile. 479 581 IPR009038 -
Lan14g0412 587 MobiDBLite consensus disorder prediction 210 240 - -
Lan14g0412 587 Pfam CRAL/TRIO domain 310 470 IPR001251 -
Lan14g0412 587 PANTHER PATELLIN-3 PROTEIN 140 586 - -
Lan14g0412 587 PANTHER PATELLIN-3 PROTEIN 14 148 - -
Lan14g0412 587 CDD SEC14 307 471 IPR001251 -
Lan14g0412 587 PRINTS Cellular retinaldehyde-binding protein signature 263 285 - -
Lan14g0412 587 PRINTS Cellular retinaldehyde-binding protein signature 428 447 - -
Lan14g0412 587 Pfam CRAL/TRIO, N-terminal domain 245 284 IPR011074 -
Lan14g0412 587 Gene3D GOLD domain 486 581 - -
Lan14g0412 587 Gene3D - 300 485 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0412 Lan-Chr14 9135333 9139710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0412 264 447 Acyl Lipid Metabolism Gene Families AT5G47730 28.351 1.73e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0412 - - gmx:100805585 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0480 15 11264529 11269057 Lan14g0412 14 9135333 9139710 LSH
Lan1g1524 1 25707569 25710766 Lan14g0412 14 9135333 9139710 PCT
Lan14g0412 14 9135333 9139710 Lan1g1524 1 25707569 25710766 PCT