Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0472 ATGTCCAAAGAAGAAGAAGTAAGACCACAAGTGGTTCTAGATGAAGCATCATTATTGAAAGACAGCACTAATGAAGAGCTCACCAAAATCCAACTTATGAGAGACTTTCTTGAAAAACGTGATCCCTCTTCTAAGGAAGTAGATGTTTTGACCCTTCGAAGATTCTTGCGCGCTCGTGATTTGGATGTAGAGAAAGGTTCAGCAATGTTCCTCAAGTACTTGACATGGAGATGTTCGTTTGTGCCAAATGGTTTTATATCTCCTTCAGAGATTTCTGATGAACTTGCACAAGGGAAGATGTTTGTGCAAGGACTCGATAAGAAGGGTCGACCTATAACTGTTGCCTTTGCTGCAAAACATTTTCAAAATAAAGATGGTCTAGATACTTTCAAACGGTTTGTAGTTTTTGCTCTTGATAAACTATGTTCAAGGATGCCACCTGGGCAAGAAAAGTTTCTTGCTATAGCCGATATTAAGGGATGGGGATATGCGAACAGTGACATTCGCGGCTACCTTAATGCTCTTACTATTTTGCAGGATTACCATCCAGAAAGATTAGGGAAATTGTTTATTGTTCATGCACCTTATATGTTTATGAAAGTATGGAAAGTTGTATACCCTTTCATTGACAATAATACCAAGAAAAAGATAGTATTTGTGGAAAACAAAAAGCTGAAAGAAACACTGCTAGAAGAGATAGATGAGAGTCAGATCCCAGAAATATATGGAGGTCAAATGCCATTAGTCCCTCTCCAAGATTGTTGA 765 0.383 MSKEEEVRPQVVLDEASLLKDSTNEELTKIQLMRDFLEKRDPSSKEVDVLTLRRFLRARDLDVEKGSAMFLKYLTWRCSFVPNGFISPSEISDELAQGKMFVQGLDKKGRPITVAFAAKHFQNKDGLDTFKRFVVFALDKLCSRMPPGQEKFLAIADIKGWGYANSDIRGYLNALTILQDYHPERLGKLFIVHAPYMFMKVWKVVYPFIDNNTKKKIVFVENKKLKETLLEEIDESQIPEIYGGQMPLVPLQDC* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0472 254 SUPERFAMILY CRAL/TRIO domain 89 247 IPR036865 -
Lan15g0472 254 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 88 250 IPR001251 -
Lan15g0472 254 SMART sec14_4 94 247 IPR001251 -
Lan15g0472 254 PANTHER OS03G0850700 PROTEIN 20 254 - -
Lan15g0472 254 Pfam CRAL/TRIO domain 97 244 IPR001251 -
Lan15g0472 254 Gene3D - 3 251 IPR036865 -
Lan15g0472 254 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 20 254 - -
Lan15g0472 254 Coils Coil 20 40 - -
Lan15g0472 254 CDD SEC14 101 245 IPR001251 -
Lan15g0472 254 SUPERFAMILY CRAL/TRIO N-terminal domain 19 84 IPR036273 -
Lan15g0472 254 SMART CRAL_TRIO_N_2 48 73 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0472 Lan-Chr15 11066980 11069194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0472 51 240 Acyl Lipid Metabolism Gene Families AT1G55840 25.822 7.05e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0472 - - gmx:100797666 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0472 15 11066980 11069194 Lan14g0384 14 8384381 8386967 LSH
Lan12g0734 12 14559253 14561629 Lan15g0472 15 11066980 11069194 PCT
Lan15g0472 15 11066980 11069194 Lan12g0734 12 14559253 14561629 PCT