Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0734 ATGTACTATATATGTTGGCATGTTGTACTACTCCCCAAGTTGGAGTGTCTAAAGGGAAAGTGCAGAACTCAAAGACAAGTTGGTTGGAGTGTAATGGCTAATCATGGAGTAATAGAGCAAGTGGTTGTAGATGATGAAGGAGTAGAGAAAGATAGCAGTGAGAGTGAGATCACTAAAATCCAACTTATGAGAGACTTTGTTGAAACACGGGATCCTTCTTCTAAGAAAGAGGATGATTTGATGTTAAGAAGATTTCTGCGTGCCCGTGGTTTAGATATTGAGAAGGCTTCAACTATGTTTCTTAAGTACTTGAAATGGAGACATTCATTTGTTCCCAATGGTTCTATATCTACGCAAGAGATTCCTAATGAACTAGCAGATGATAAGGTATTTGCACAAGGACATGATAAGAGTGGTCGACCTATAGGTATTATCTGTGGTGCAAAACATTTTCAGAACAAAAATGGTCTGGAAGAATTCAAACGGTTTGTAGTATATGCTTTTGATAAATTATGTGCAAGCATGCCACCAGGGCAAGAAAAGTTCTTTGGTATAGCAGATCTTAAGGGATGGAAATATTCAAACTGTGACGTGCGAGGATACATTAGTGGTCTAAACATTTTGCAGGATTATTACCCCGAAAGATTTGGGAAGTTTCTTATTGTCCATGCACCTTACATTTTTATGAAAGTGTGGAAAATGATTTACCCCGTTCTTGATGACAAAACCAAGAAAAAGATAATACTCGTAGAGAAAAATAAGCTGAAGTCAACACTGATGGAAGATATAGATGAAAGTCAACTCCCAGAGATATATGGAGGTCCTCTGCCATTAGTCCCTATCCAACATATCTAA 855 0.3778 MYYICWHVVLLPKLECLKGKCRTQRQVGWSVMANHGVIEQVVVDDEGVEKDSSESEITKIQLMRDFVETRDPSSKKEDDLMLRRFLRARGLDIEKASTMFLKYLKWRHSFVPNGSISTQEIPNELADDKVFAQGHDKSGRPIGIICGAKHFQNKNGLEEFKRFVVYAFDKLCASMPPGQEKFFGIADLKGWKYSNCDVRGYISGLNILQDYYPERFGKFLIVHAPYIFMKVWKMIYPVLDDKTKKKIILVEKNKLKSTLMEDIDESQLPEIYGGPLPLVPIQHI* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0734 284 PANTHER OS03G0850700 PROTEIN 44 283 - -
Lan12g0734 284 CDD SEC14 130 274 IPR001251 -
Lan12g0734 284 Pfam CRAL/TRIO domain 129 274 IPR001251 -
Lan12g0734 284 SMART CRAL_TRIO_N_2 78 103 IPR011074 -
Lan12g0734 284 SUPERFAMILY CRAL/TRIO domain 121 277 IPR036865 -
Lan12g0734 284 Gene3D - 46 281 IPR036865 -
Lan12g0734 284 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 118 280 IPR001251 -
Lan12g0734 284 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 44 283 - -
Lan12g0734 284 SUPERFAMILY CRAL/TRIO N-terminal domain 50 114 IPR036273 -
Lan12g0734 284 SMART sec14_4 124 277 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0734 Lan-Chr12 14559253 14561629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0734 53 269 Acyl Lipid Metabolism Gene Families AT5G47730 26.050 1.16e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0734 - - lang:109362343 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0734 12 14559253 14561629 Lan15g0472 15 11066980 11069194 PCT
Lan12g0734 12 14559253 14561629 Lan14g0384 14 8384381 8386967 PCT
Lan15g0472 15 11066980 11069194 Lan12g0734 12 14559253 14561629 PCT
Lan14g0384 14 8384381 8386967 Lan12g0734 12 14559253 14561629 PCT